Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00267 ATGGATCATTATTATTATTATTCATCATTCTCTGTTCCACCACCATATGCAACTACATCAAACTTTAATCAATCCCTTCCCTTCAACGAAAATGACTCCGAGGAAATGCTTCTATGCGAGGTTCTTGCACAGGGAAGTGGCGGTGATGCAGCGGAAAACTCCTCCATCGAAGAGGTGAACTCAACCATGGCGGCGCTGCAGCCACAACAAGCATCTTACAGAGGGGTAAGAAGGAGGCCATGGGGAAAGTACGCGGCAGAGATAAGGGACTCTACGAGGAACGGCGAGAGGGTATGGTTGGGAACCTTTGATACGGCGGAGGAAGCTGCTTTGGCTTACGACCAAGCGGCATTGGCAAGTAGAGGATCAGTGGCGATTTTGAACTTCCCGGCAGGGATGGTTGTTGAGTCGCTAGAGAAGATGATGATGGAGTGTGGTGGGTTTAGTGAAGGTTGTTCTCCGGTGTTGGAGCTGAAGAAGAAGCATTCCATGAAGAGGAAGATGGAGAACAGGGAGAAGAAACTGCTCATGATGATGAATACAAATAATAACAACAATCATCATAATCATAATCATGTCATGGTATTCCAGGATTTGGGTGCTGACTATTTGGAACAACTTCTTACGCTCTCGTCCAAGGATGCAATGCTATAG 654 0.4664 MDHYYYYSSFSVPPPYATTSNFNQSLPFNENDSEEMLLCEVLAQGSGGDAAENSSIEEVNSTMAALQPQQASYRGVRRRPWGKYAAEIRDSTRNGERVWLGTFDTAEEAALAYDQAALASRGSVAILNFPAGMVVESLEKMMMECGGFSEGCSPVLELKKKHSMKRKMENREKKLLMMMNTNNNNNHHNHNHVMVFQDLGADYLEQLLTLSSKDAML 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00267 217 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Adu06g00267 217 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Adu06g00267 217 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Adu06g00267 217 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Adu06g00267 217 PANTHER DNA-BINDING DOMAIN 20 210 IPR044808 GO:0003700|GO:0009873
Adu06g00267 217 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Adu06g00267 217 Gene3D AP2/ERF domain 72 131 IPR036955 GO:0003700|GO:0006355
Adu06g00267 217 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Adu06g00267 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 20 210 - -
Adu06g00267 217 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00267 Adu-Chr6 3269520 3270173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00267 26 208 AP2-EREBP Transcription Factor Family AT3G23240 51.913 1.21e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu06g00267 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00267 K14516 - fve:101312740 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00267 06 3269520 3270173 Adu09g01966 09 99309662 99310708 ECH
Adu02g00823 02 13349455 13350195 Adu06g00267 06 3269520 3270173 ECH
Adu06g00267 06 3269520 3270173 Adu06g00267 06 3269520 3270173 ECH
Adu06g00267 06 3269520 3270173 Adu02g00819 02 13303430 13304176 PCT