Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00265 ATGGCGAATCGATGGTGGACCGATCCGGTGGGTCTGACCGGAGTAGACAACTCCACCAACTCTCCCATCAAGAAACCCGATCTGGGTTTATCTGCTCCCATCAACAAGCACGAAGAACAAGATGACAACAACAGCGACGACTACCCCAAGGAAGGAGCAATCGAGCTCTCCGCCACGCGCCGCCCAAGGGGCCGTCCTCCTGGTTCCAAGAACAAGCCCAAGCCGCCGATATTCGTCACCAGAGACAGCCCTAACGCACTCAGAAGCCACGTCATGGAGGTTGCTAACGGTGCTGACATCACCGATAGCTTGGTTCAGTTCGCAAGGAAGCGACAGAGAGGGGTCTGCGTTCTCAGCGCCACCGGGACAGTCGCCAACGTCACTCTCCGGCAGCCAACTGCTCCCGGCGCCGTCATGGCACTCCATGGGCGATTTGAGATCATATCTTTAACAGGCTCGTTTCTTCCCGGGCCGTCGCCGGCGGGGTCGACGGGGCTGACCGTGTACCTGGCTGGAGGGCAGGGGCAGGTGGTGGGCGGCGGGGTGGTGGGGCCTCTTGTGGCGTCGGGATCAGTTATGATAATGGCGGCAGGTGGTTCCGGCGGGGATGGTTATATGGTTGGGCAGCTCAGCCATGAAGGTTCTTGGGGTCATTCGAGACCACCACCACCCCCCTATTGA 681 0.5991 MANRWWTDPVGLTGVDNSTNSPIKKPDLGLSAPINKHEEQDDNNSDDYPKEGAIELSATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGADITDSLVQFARKRQRGVCVLSATGTVANVTLRQPTAPGAVMALHGRFEIISLTGSFLPGPSPAGSTGLTVYLAGGQGQVVGGGVVGPLVASGSVMIMAAGGSGGDGYMVGQLSHEGSWGHSRPPPPPY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00265 226 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 197 IPR005175 -
Adu06g00265 226 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 197 - -
Adu06g00265 226 MobiDBLite consensus disorder prediction 1 84 - -
Adu06g00265 226 ProSiteProfiles PPC domain profile profile. 84 224 IPR005175 -
Adu06g00265 226 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 198 IPR014476 GO:0003680
Adu06g00265 226 Gene3D - 87 201 - -
Adu06g00265 226 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 198 - -
Adu06g00265 226 MobiDBLite consensus disorder prediction 31 58 - -
Adu06g00265 226 CDD DUF296 88 171 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00265 Adu-Chr6 3232906 3233887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00265 1 197 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.981 6.10e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00265 - - aprc:113863548 291.197