Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00264 ATGGAAAGAGGAGTGTGTCCTATCCTGTTGTTGGTGCTGGTTTTTTCTCTTGTGCTCTCTGTTTATGCTATGGATGTTGAGTTTGGACCCTGCCATAATTGTGATGATGAGGAAGGGATTTGGACCATCCAGAGCATCCTGGTTTGCCAAAAAGTCAGTGACTTCTTCATTGCCATTGCATATTTTTCCATACCCCTTGAGCTACTTTACTTCATTAGCTACTCCAATGTCCCATTCAAATTGGTCTTCCTTCAGTTCATTGCCTTCATTGTTCTCTGTGGATTGACACATTTGCTCAATGCCTACACCTATTATGGCTCTCCCTCATTCCAGCTTTTGATCTCTCTCACTGTTGCGAAATTCCTTACTGCTCTTGTGTCCTGTGCTACTGCAATCACCTTTCCTACTCTCATTCCCCTTCTTCTCAAGATCAAAGTGAGAGAGCTTTTCTTGAGGCAGAATGTGTTGGAACTGGGCCAAGAGGTTGGGATGATGAAGAAACAGAAGGAAGCGAGCTGGCATGTTCGAATGCTGACTCGCGAAATTAGGAAGTCTCTGGATAAGCACACTATCTTGTATTCCACCCTTGTTGAGCTTTCCAAGGCCTTGGATCTGCATAACTGTGCTGTGTGGATGCCCGACAATGACAGGCGAGAGATGCATTTGACCCATGAATTGAAACCGAGTTCGGCTAATAAATTAAAAATTTCTATTCCTATAAGTGATCCAGATGTGTTGGAGATAAGAAAGAGTAAGGGTGTGCAGATTTTGGGGCCTGATTCTGCATTGGGAGCTGCTAGTGGTGGTGAATCTGGGGAGTCGGGTTCTGTAGCAGCTATCCGCATGCCGATACTTCATGTTTCTAATTTCAAAGGAGGGACACCGGAAATGGTTGATACATCTTATGCTATACTGGTTTTGGTTCTCCCAAATTTAAACTCAAGGGCTTGGAACCCCCATGAGATGGATATAGTAGAAGTAGTTGCTGATCAGGTTGCTGTAGCCTTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTGATGAGGCAGAAACTTGCAGAGCAAAACCGAGCGCTGCAACAGGCTCAAAAGAATGCAATGATGGCCAGCCAGGCAAGGAGCTCATTTCAGAAAGTCATGAGTAATGGAATGCGAAGGCCTATGCATTCAATCCTTGGTTTGCTTTCAATATTTCAAGAGGACAATCTAAGACCTGAACAGAAGATTATTATTGACACAATGTTGAGAGTTAGCAATGCACTTTCCAGTTTGATTAGTGATGTAATGGAGATTTCGGCAAATGACAAAGGAAGCTTTCGGTTAGAGATGAAACCTTTCGATCTGCATTCCATGACGAGGGAAGTTTCTTGCATTGCTAAGTGTTTGTGTGTACATAAAGGCTTTGGTCTTGAAATTGATGTCCACAAGGGTTTACCAGGGTTGGTTATAGGTGATGAGGCAAGGTCTTTCCAAGTAATTTTGCACTTGATAGGTTATCTGTTGAACATGTATGACAAAGGGACTCTCATTTTTCGAGCATTTCCTGAAAATGATAGTGGAAATAAGGATGATAAAGGTCTTGGAATATGGAGATCAAGTGTGCAACATGACTATGTATATGTAAAATTTAGTTTTCGGGTAACGGGCATTACTTCCGAGTCAGATGTATTAAATTCAGCAAAACATTATTCTGATAGAAGGCACTACAACAATGAACCTAATGAGGGCCTGAGCTTCAGCATGTGCAAAACGCTGGTGCAGATGATGCAAGGTAATATCTGGATGTCGCCAAACTCGTCGGGTTTGGCTCAAGGCATGACACTTCTTCTCAAGTTTCAGCTAGGTCGACCCTCGGTTGGAAGATCCACATTTGCACTAAAAGATGCTCCAAACCCTCAGTTTAGAGGCCTTAAGGTTGTGTTGGCAGACGACGATAATGTAAACAGGACCGTGACAAAGAAGCTGCTCGAGAAGCTTGGTTGTCAAGTAACCGCTGTTTCATCAGGTTTCCAGTGCCTCAGTGCTGTAAGCGCCTCCGGCAACACGTACAAAATTATCCTCTTAGATCTTCACATGCCTGAAATGGATGGCTTCGAAGTAGCTAGAAGGATCCGAAAGTTCCATAGCCGTAGTTGGCCCATGATTATAGCTCTTACCGCGAGCGCGGAAGATCATGTGAGGGAGAAATGCATACAGGTGGGAATGCATGGATTGATTCGCAAACCAATTCTTCTTCAAGAGATGGCCGATGAACTCAGGACAGTGTTGCAACGTGCAGGTATACAGAACCAGTTGTCACCATGGAACAAAAATAGATGA 2319 0.4373 MERGVCPILLLVLVFSLVLSVYAMDVEFGPCHNCDDEEGIWTIQSILVCQKVSDFFIAIAYFSIPLELLYFISYSNVPFKLVFLQFIAFIVLCGLTHLLNAYTYYGSPSFQLLISLTVAKFLTALVSCATAITFPTLIPLLLKIKVRELFLRQNVLELGQEVGMMKKQKEASWHVRMLTREIRKSLDKHTILYSTLVELSKALDLHNCAVWMPDNDRREMHLTHELKPSSANKLKISIPISDPDVLEIRKSKGVQILGPDSALGAASGGESGESGSVAAIRMPILHVSNFKGGTPEMVDTSYAILVLVLPNLNSRAWNPHEMDIVEVVADQVAVALSHASVLEESQLMRQKLAEQNRALQQAQKNAMMASQARSSFQKVMSNGMRRPMHSILGLLSIFQEDNLRPEQKIIIDTMLRVSNALSSLISDVMEISANDKGSFRLEMKPFDLHSMTREVSCIAKCLCVHKGFGLEIDVHKGLPGLVIGDEARSFQVILHLIGYLLNMYDKGTLIFRAFPENDSGNKDDKGLGIWRSSVQHDYVYVKFSFRVTGITSESDVLNSAKHYSDRRHYNNEPNEGLSFSMCKTLVQMMQGNIWMSPNSSGLAQGMTLLLKFQLGRPSVGRSTFALKDAPNPQFRGLKVVLADDDNVNRTVTKKLLEKLGCQVTAVSSGFQCLSAVSASGNTYKIILLDLHMPEMDGFEVARRIRKFHSRSWPMIIALTASAEDHVREKCIQVGMHGLIRKPILLQEMADELRTVLQRAGIQNQLSPWNKNR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00264 772 ProSiteProfiles Histidine kinase domain profile. 379 616 IPR005467 -
Adu06g00264 772 Gene3D - 436 616 IPR036890 -
Adu06g00264 772 Pfam GAF domain 189 336 IPR003018 GO:0005515
Adu06g00264 772 PIRSF Ethylen_sen_hybr_HK 5 762 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Adu06g00264 772 PANTHER TWO-COMPONENT HISTIDINE KINASE 8 757 - -
Adu06g00264 772 PANTHER ETHYLENE RECEPTOR 8 757 - -
Adu06g00264 772 SMART gaf_1 187 346 IPR003018 GO:0005515
Adu06g00264 772 Gene3D - 637 771 - -
Adu06g00264 772 SMART HisKA_10 372 437 IPR003661 GO:0000155|GO:0007165
Adu06g00264 772 SUPERFAMILY CheY-like 633 758 IPR011006 -
Adu06g00264 772 SUPERFAMILY GAF domain-like 190 339 - -
Adu06g00264 772 ProSiteProfiles Response regulatory domain profile. 638 756 IPR001789 GO:0000160
Adu06g00264 772 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 441 598 IPR036890 -
Adu06g00264 772 CDD HisKA 370 432 IPR003661 GO:0000155|GO:0007165
Adu06g00264 772 CDD REC_ETR-like 637 752 - -
Adu06g00264 772 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 357 437 IPR036097 GO:0000155|GO:0007165
Adu06g00264 772 Coils Coil 342 372 - -
Adu06g00264 772 SMART REC_2 637 752 IPR001789 GO:0000160
Adu06g00264 772 Pfam Response regulator receiver domain 639 751 IPR001789 GO:0000160
Adu06g00264 772 Gene3D - 338 435 - -
Adu06g00264 772 Gene3D - 165 337 IPR029016 -
Adu06g00264 772 CDD HATPase_ETR2_ERS2-EIN4-like 478 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00264 Adu-Chr6 3220873 3224626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00264 25 759 Miscellaneous Gene Families AT3G04580 60.481 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g00264 GAF 1e-10 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00264 K14509 - gmx:100805023 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00264 06 3220873 3224626 Adu09g02003 09 101223833 101227882 ECH
Adu06g00264 06 3220873 3224626 Adu06g00264 06 3220873 3224626 ECH