Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00260 ATGGCTGCTGCATCAGCAATACTAACTCACATGAAAGCCTGGGCCTATTCTGACCATGGCAAATCAAACGTTGCTATGAAATTCCACCCCAGTTTTCCTGTTCCTGAACTCAAAGCAGATCAGGTACTAATCAAGGTCGTTGCTGCAGCCATAAATCCCATAGATTATTATAAGATTGCAGGGAGTTACAACGATTCGGACGCCCTTTTTCCGATTGTTCCTGGCTATGATGTTGCGGGGTGGGTGATCAAGGTAGGAAGTGAAGCAAAGAAGTTTAAAGAAGGAGATGAAGTGTATGGTATCGTTGAGGCAAAAGATGTTGGGTCTTTGGCTGAATATACAACAGTACAAGAGAATGGTTTGGATCACAAGCCTCCTAATTTGACCTTTGCTGAAGCTGCTAGCCTTCCTTTGGCCATTGAGACTGCTTATGGTGCCCTTCAGAAACTTCACCTTTCTGCCGGTCAATCTATCCTTGTTCTCGGAGGCGGCGGTGGTGTCGGAACCCTTGCTGTTCAGATTGCCAAACATGTTTTTGGTGCTTCAAAGGTAGCAGCTACAGTCAGCACTGGAAAACTAGAATTGATGAGGAAGCTAGGGGTTGATTTGCCAATTGATTATACAAAGGAAAACTTTGAAGACTTGCCAGAAAAATTTGATGCTGTGTTTGATGCAGTAGGGGAGACTAACAAGGCATTTAAAGCCCTGAAAGAAGGTGGGAAAGTGGTGACAATAGTGCCTCCTGGGGTTTCATCAGCTATGTTGTTCATACTCAGCAGCCCTGATGGGTCTATGTTGCAGAAACTAAGGCCCTACTTGGAGAATGGCAAGGTGGTGCCAGTACTCGACCCCAAAAGCCCATTTCCATTTTCACACACTATTCAAGCATTCTCCTACCTTCAAACACGTAGACCAGCTGGAAAGATAGTCATCTATCCCATATCCCAACATCTTTAA 957 0.4483 MAAASAILTHMKAWAYSDHGKSNVAMKFHPSFPVPELKADQVLIKVVAAAINPIDYYKIAGSYNDSDALFPIVPGYDVAGWVIKVGSEAKKFKEGDEVYGIVEAKDVGSLAEYTTVQENGLDHKPPNLTFAEAASLPLAIETAYGALQKLHLSAGQSILVLGGGGGVGTLAVQIAKHVFGASKVAATVSTGKLELMRKLGVDLPIDYTKENFEDLPEKFDAVFDAVGETNKAFKALKEGGKVVTIVPPGVSSAMLFILSSPDGSMLQKLRPYLENGKVVPVLDPKSPFPFSHTIQAFSYLQTRRPAGKIVIYPISQHL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00260 318 Pfam Alcohol dehydrogenase GroES-like domain 40 99 IPR013154 -
Adu06g00260 318 Pfam Zinc-binding dehydrogenase 199 311 - -
Adu06g00260 318 Gene3D - 147 262 - -
Adu06g00260 318 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 3 315 - -
Adu06g00260 318 CDD MDR_like_2 11 311 - -
Adu06g00260 318 SMART PKS_ER_names_mod 21 311 IPR020843 GO:0016491
Adu06g00260 318 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 155 176 IPR002364 GO:0008270|GO:0016491
Adu06g00260 318 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 315 IPR044626 GO:0016628
Adu06g00260 318 SUPERFAMILY GroES-like 9 160 IPR011032 -
Adu06g00260 318 Gene3D - 20 311 - -
Adu06g00260 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 253 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00260 Adu-Chr6 3180685 3182875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00260 12 131 Monolignol Biosynthesis Gene Families AT2G21730 28.099 6.74e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00260 K18980 - gmx:100817947 392.119