Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g00258 | ATGTTGAAGCTGTCTCGCCTTCTACCTTCCATTTCCGGTTCCAGCCCCCGCTTACTGGAACCCCTCTCCTTTACAAAACCTGATCCTAGGGATTCAGCTGCGTTTTCTACAGCTACCAATAATAAATATGCTGCTAAAGGATATACGTCAAATCGCATATTTGCTCCTTATTCCGTTTACAAGGGCAAAGCTGCTTTCTCTTTGAGTCCTTGTCTTCCAACTTTCACCAAGTTGGATAGTGGGGCCGTTGTAGTTGATCGCCGTGGTTCAATGATGATGATTTTCATGCACTCCATTGGGGAGCGCAAGTATGACTGGGAGAACAAGCAGAGATTTGCTCTCTCGGCGACTGAAGTTGGCTCTTTGATAAGCATGGGCCCTCAGGATTCTTGTGAATTCTTTCATGATCCCTCCATGTTATCGAGTAATGCTGGTCAAGTGAGAAAAAGCTTATCAATTAAGCCTCATGCAAGCAGCAATGGCTACTTCGTGTCTTTGACTGTTGTCAATAACCTGCTAAATACCAAGGATTACTTGAGTGTCCCTGTCACGACTGCTGAGTTTGCTGTGATGAAGACAGCTTGCAGTTTTGCATTGCCACACATCATGGGTTGGGACCGCATGACTCATCAGTCAGGGGGCACGGTTGGTCTTCAATCGAAAGTGGAACCACCTGCTTTAGACTTGGAATGGGATAAGTAA | 702 | 0.4587 | MLKLSRLLPSISGSSPRLLEPLSFTKPDPRDSAAFSTATNNKYAAKGYTSNRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGAVVVDRRGSMMMIFMHSIGERKYDWENKQRFALSATEVGSLISMGPQDSCEFFHDPSMLSSNAGQVRKSLSIKPHASSNGYFVSLTVVNNLLNTKDYLSVPVTTAEFAVMKTACSFALPHIMGWDRMTHQSGGTVGLQSKVEPPALDLEWDK | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g00258 | 233 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 32 | 233 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Adu06g00258 | 233 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 50 | 212 | IPR009044 | GO:0003677|GO:0006355 | |
Adu06g00258 | 233 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 32 | 233 | - | - | |
Adu06g00258 | 233 | Pfam | Whirly transcription factor | 59 | 193 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Adu06g00258 | 233 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 43 | 213 | IPR009044 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g00258 | Adu-Chr6 | 3150092 | 3152749 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g00258 | 34 | 233 | Whirly Transcription Factor Family | AT1G71260 | 61.321 | 6.94e-90 | 263 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Whirly | Adu06g00258 | Whirly | 1.2e-54 | CL0609 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g00258 | - | - | var:108343725 | 345.125 |