Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00241 ATGGCGAGGAGAGAGAGAGGTTTGTCTGCATCTGCGGCGGATGGAGGTGGTGGAAAAGCGGCGGAATTGAAGGAGAAGCTGAGGGGGCTGGTGAAGGCCATCTTGGAGGACGACGACTACACCACGCGCCACGCTGAAGACGCCATCGCCACTCTATCGACTCTTAGGGATTTGAAGAGAGCATCGCCCTCATCCTTCTATGATTTCAGCTTCCCCGTTCCTCCTGAATTTCGATGCCCCATTTCCACCGAGTTGATGATTCCTCCTTTCCCCTTCAATTTTATTTACTTTTTTTTTCTCTTCACGCTGTTTTATTTTATTTTTATTTTTTATACTTATGATCGGGCATACATTCAGAGGTGGTTGGATGAAGGGCACAGAACATGCCCTCAAACCCAACAAGTCCTTTCTCACACTAATCTTACTCCAAATTACTTGGTCCGGGACATGATTGCGCAGTGGTGTAAAGAGCATGCAATTGAGATGCCAAAGCCGGTTCAGGACATCAACCAAGTAGTAAGTAATGCGGATAGAGACCACTTGGATTCATTACTTCATAAGCTGTCATTGTCTGTCCCTGATCAGAAAGAAGCTGCAAGAGAGCTTCGCCTCCTAACAAAGAGAATGCCTTCCTTTAGAACCCTCTTTGGGGAGTCGGTTGATGTGATTCCGCAGTTGCTCAGTCCATTATCGCCTAATACGGCTCATGTTCACCCCGATCTCCATGAGGACTTGATTACAACTATTCTAAATCTCTCGATTCAAGACGATAATAAGAAAGTATTTGGAGAGGATCCAACTGTCATTGCTCTTCTCATTGATGCCTTGAAATCCGGAACAATTCAAACAAGGAGCAATGCCGCAGCAGCCATTTTCACATTATCGGCTCTTGACTCCAACAAGCACATCATTGGAAAGTCTGGAGCCATCAAACATTTGCTTGACCTTTTAGAGGAGGGACAGCCATTAGCCGTGAAAGATGCTGCCTCAGCTATATTCAACCTATGTCTTGTGCACGAGAATAAAGGGAGGACCGTGAGAGAAGGTGCAGTCCGGGTCATTCTGAAGAAGATCATGGACCACATTCTAGTTGATGAGTTGCTCGCTATATTGGCACTCCTTTCCAGCCATCCCAAGGCCATTGAAGAAATGGGGGATCTTGGAGCTGTAGCTTTCTTGCTGGCTATCATAAGGGAGGGCACGTCAGAGCGAACCAAGGAGAATTGTGTTGCAATTTTATATACAATCTGTTACGGTGATAGAACAAAGTTGAAGGAAGTTAGAGAAGAAGAAAAAGCCAACGGTACCCTGTCTAAACTTGCACGACACGGGACTTCAAGGGCAAAAAGGAAGGCTAATGGAATTCTTGAGAGGCTCAATCGATCACCCTGCTTAACACACACTGCTTAA 1410 0.4589 MARRERGLSASAADGGGGKAAELKEKLRGLVKAILEDDDYTTRHAEDAIATLSTLRDLKRASPSSFYDFSFPVPPEFRCPISTELMIPPFPFNFIYFFFLFTLFYFIFIFYTYDRAYIQRWLDEGHRTCPQTQQVLSHTNLTPNYLVRDMIAQWCKEHAIEMPKPVQDINQVVSNADRDHLDSLLHKLSLSVPDQKEAARELRLLTKRMPSFRTLFGESVDVIPQLLSPLSPNTAHVHPDLHEDLITTILNLSIQDDNKKVFGEDPTVIALLIDALKSGTIQTRSNAAAAIFTLSALDSNKHIIGKSGAIKHLLDLLEEGQPLAVKDAASAIFNLCLVHENKGRTVREGAVRVILKKIMDHILVDELLAILALLSSHPKAIEEMGDLGAVAFLLAIIREGTSERTKENCVAILYTICYGDRTKLKEVREEEKANGTLSKLARHGTSRAKRKANGILERLNRSPCLTHTA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00241 469 Gene3D - 218 362 IPR011989 -
Adu06g00241 469 Pfam Armadillo/beta-catenin-like repeat 300 336 IPR000225 GO:0005515
Adu06g00241 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 161 IPR013083 -
Adu06g00241 469 Gene3D - 363 463 IPR011989 -
Adu06g00241 469 SMART Ubox_2 76 154 IPR003613 GO:0004842|GO:0016567
Adu06g00241 469 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 9 18 467 - -
Adu06g00241 469 SUPERFAMILY RING/U-box 111 165 - -
Adu06g00241 469 ProSiteProfiles U-box domain profile. 72 161 IPR003613 GO:0004842|GO:0016567
Adu06g00241 469 PANTHER U BOX DOMAIN-CONTAINING 18 467 - -
Adu06g00241 469 SUPERFAMILY ARM repeat 189 459 IPR016024 -
Adu06g00241 469 Pfam U-box domain 111 159 IPR003613 GO:0004842|GO:0016567
Adu06g00241 469 SMART arm_5 297 337 IPR000225 GO:0005515
Adu06g00241 469 SMART arm_5 255 296 IPR000225 GO:0005515
Adu06g00241 469 SMART arm_5 377 418 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00241 Adu-Chr6 2915340 2917191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00241 150 469 U-box Gene Family AT3G07360 58.359 2.56e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00241 - - gmx:100806619 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00241 06 2915340 2917191 Adu06g00241 06 2915340 2917191 ECH