Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00238 ATGCCAGCACACTCGTGTGGCTTTGACGCGTTGTTCATGGACAAGGAAATCTACCATTGCTCCAACTTGGCTATGCAAGATGTTGCATCCATGCCGCAGTACCAAGATACCTTGAACCAATGCTCACACTTCGATCAACCGTTTGTTGAGGCATGTCCGGATTGTACCACTGCAATATTGAGCCTGAGAGACGCTTTGAACGGAGGCAACGGAGATGGCGCAGACAGAGCCGTATGCGGGGTGGCAGCTCTTGTTGCTGTTATGGGTGGCAAACAAAATGACCCATCTCTCGCTGACAAATTCTTACGCTGCTTGCCACCGATTTCGGTCAAAAAATCAAAATATTCGGCAAGTCTAGTGTTAATAAGCGTGCCAGTAGTGGTGGTAGTATTGTTGTTGATAGCTCTACTGGTAAAGTATACACACAAGAAGAAGAAGCAGCCATTGAGGCCATTTCAATTGAAGGAGATAACATCATGGGCAGGACTATACTGCTTCACGAAACAAGAAATCGAAAAGGCAATGAATTACGGGGATGAGAAGATATGCCTAGGACGCGGAAGTGCCGGGCAGGTTTACAGAGGCGTTCTCCCCAGCGGTCAGCTTGTTGCCATCAAGCATTTGACCAAGAGCAGCCCTTCTGATTCATTCACTCGGGAGATTCAAGGCCTTTCTAGACTTCGCCATCCCAACCTTGTTTGTCTTTTTGGTTGTTGCATTGAAGGTGACGAGAAATATTTAGTTTATGAATTTTGTGCTAACGGAAATCTAGCTCAACATCTACTAAAAAAAGACTGCCATTTGAATTGGGAAACAAGAGTGAAAATTTTGAGGGATTGTTCATATGCACTAAAGTATCTCCACCATCATATAGAAGGCTGCGTTGTCCATAGAGATATAAAGCTGACAAACATACTTCTGACGGAGGAATACCAAGCGAAACTGTCGGATTTCGGATTGGCAAGGATGATGGGGGTAGAAGAGAGCAAGGTATTCACAGACATTAGAGGGACAATAGGGTACATGGATCCTGAGTACATGAGCAATGCGAAGCTAACCTGTGCAAGTGACGTGTACAGTTTTGGGATTGTGGCTTTACAAATCCTTTCAGGACAGAAAGTGATAGAGATGGATCTTGATGCAAGAGACCAGCTGACCAGAAAGGCTCGAGATGTAAGTATGGGAAAGCGTCCGCTGAGGGATTTTGAGGACCCGAGGCTAGGAGGCGAGGTTAACAAGGCGAACTTCGAATCTATATTGCACATAGCGGTTCTGTGTGTTGCAAAACACGGCAAGAGTCGTCCAACCATTGAAGTTATCTTTGACGAGCTCGACGCCGTCTATAAGGACACCTGTTTACGCATCTCCGCCGCAAAGCAAGACAATAATAAGCGCCCGCCATCTTCGTCAACTCCATCCACCAGCTCAAGCTCCAAGTCCCCCAAACAGATCTCTGTTTGA 1461 0.462 MPAHSCGFDALFMDKEIYHCSNLAMQDVASMPQYQDTLNQCSHFDQPFVEACPDCTTAILSLRDALNGGNGDGADRAVCGVAALVAVMGGKQNDPSLADKFLRCLPPISVKKSKYSASLVLISVPVVVVVLLLIALLVKYTHKKKKQPLRPFQLKEITSWAGLYCFTKQEIEKAMNYGDEKICLGRGSAGQVYRGVLPSGQLVAIKHLTKSSPSDSFTREIQGLSRLRHPNLVCLFGCCIEGDEKYLVYEFCANGNLAQHLLKKDCHLNWETRVKILRDCSYALKYLHHHIEGCVVHRDIKLTNILLTEEYQAKLSDFGLARMMGVEESKVFTDIRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIEMDLDARDQLTRKARDVSMGKRPLRDFEDPRLGGEVNKANFESILHIAVLCVAKHGKSRPTIEVIFDELDAVYKDTCLRISAAKQDNNKRPPSSSTPSTSSSSKSPKQISV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00238 486 Gene3D Phosphorylase Kinase; domain 1 138 251 - -
Adu06g00238 486 ProSiteProfiles Protein kinase domain profile. 178 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00238 486 SUPERFAMILY Protein kinase-like (PK-like) 159 443 IPR011009 -
Adu06g00238 486 MobiDBLite consensus disorder prediction 458 486 - -
Adu06g00238 486 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 75 462 - -
Adu06g00238 486 PANTHER OS01G0750732 PROTEIN 75 462 - -
Adu06g00238 486 Pfam Protein kinase domain 184 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00238 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Adu06g00238 486 SMART serkin_6 178 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00238 486 Gene3D Transferase(Phosphotransferase) domain 1 252 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00238 Adu-Chr6 2888035 2889835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00238 111 444 Receptor kinase-like Gene Family AT2G19230 35.882 1.07e-57 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Adu06g00238 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00238 - - gsj:114407767 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00238 06 2888035 2889835 Adu02g00234 02 2612928 2615763 PCT