Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00219 ATGTGCAGAAAAACTGTGATATGCAAAGTTCGCGAACCCGGTGTTGGTCATACTCTTAATGCAGAAACAACACCCAAGGTTGTTCGTGTTTCAGTAATGGATCCGGAGATCACTGATTCTTCGAGTGACGAGGAGGAATATCAACAGTATCAAGGACGACGAACCAAAGTGAATTCGAAACACATTGTAAACGAGATAAGAATTTTGTATCCGCCATCTCACAACACCACCAAGGTGCAAAGATCTAAACAGCAACAACAACAGAACAAGGGCAAAAAAGTGGTTGTAGCTGCCATGAAAGCTTCTTCTTCTTGTTCTCAAGAGGGTAGGAAGCTACGCGGCGTTAGGCAAAGGCCATGGGGAAGATGGGCCGCGGAGATCCGAGACCCTGTGAAGCGTACGAGGTTGTGGTTAGGAACCTACGACACTGCCGAAGAAGCCGCCATGGTTTATGACAGAGAAGCCATTCGCCTTCGAGGTTCTCATGCTCAAACTAATTTCCTCAAGCCTCCAAAGGAGGAAGAATATGATGAACAAGTTTTTGATATCAACAATATGAAGAACATGCCTTCTCCTACTTCTCCTACTTCTCCCACTTCTGTTCTTCTATTTAAGTCTGATGGATCTGGAAGTAAGGTTTCAGGAGAGGATCAAAGCGAGTTCAGAGATGAATCTCCTTCTTCTTCCTATTTTCAGGATGCATTGTTTTTAGATTCACCTTCTATTGATTTTTGTTTATCGGATTTTGAGACTCCTCCCCCAATATTTCTTGATGAAACTTGCCTACCCCATCTTATTTTCAGTGACAGCAATTTCAGTGATGCTACCATTGACCAGTCTATTGAATTATGTAATTTCGATTTAGATGATTACTTTTGCAGTGATCAAGAGGAAGCTTTTCATGTTTAG 909 0.4235 MCRKTVICKVREPGVGHTLNAETTPKVVRVSVMDPEITDSSSDEEEYQQYQGRRTKVNSKHIVNEIRILYPPSHNTTKVQRSKQQQQQNKGKKVVVAAMKASSSCSQEGRKLRGVRQRPWGRWAAEIRDPVKRTRLWLGTYDTAEEAAMVYDREAIRLRGSHAQTNFLKPPKEEEYDEQVFDINNMKNMPSPTSPTSPTSVLLFKSDGSGSKVSGEDQSEFRDESPSSSYFQDALFLDSPSIDFCLSDFETPPPIFLDETCLPHLIFSDSNFSDATIDQSIELCNFDLDDYFCSDQEEAFHV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00219 302 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED 4 294 - -
Adu06g00219 302 CDD AP2 111 167 IPR001471 GO:0003700|GO:0006355
Adu06g00219 302 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Adu06g00219 302 PRINTS Ethylene responsive element binding protein signature 134 150 IPR001471 GO:0003700|GO:0006355
Adu06g00219 302 ProSiteProfiles AP2/ERF domain profile. 111 168 IPR001471 GO:0003700|GO:0006355
Adu06g00219 302 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 294 - -
Adu06g00219 302 SUPERFAMILY DNA-binding domain 111 167 IPR016177 GO:0003677
Adu06g00219 302 Pfam AP2 domain 111 160 IPR001471 GO:0003700|GO:0006355
Adu06g00219 302 SMART rav1_2 111 174 IPR001471 GO:0003700|GO:0006355
Adu06g00219 302 Gene3D AP2/ERF domain 111 169 IPR036955 GO:0003700|GO:0006355
Adu06g00219 302 MobiDBLite consensus disorder prediction 185 215 - -
Adu06g00219 302 MobiDBLite consensus disorder prediction 185 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00219 Adu-Chr6 2755711 2756619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00219 4 206 AP2-EREBP Transcription Factor Family AT4G27950 41.429 3.24e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu06g00219 AP2 9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00219 - - adu:107491972 586.26