Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00192 ATGACGGAGTCACCGTCGGATAGGCGGTGTAAGCGCACCGCCGGCCCAAATTGGCGGTGCAGCGGGGTGGCGTCGCTGGGAAAATCGTTCTGCGAGAAACACTTGCAGCAGCGTGCGCTTCAAGACCAGAAACGCAGAATTAAGAGGAACGAAGGGAACGAATCAGAGCGCAGGTCCAACAAGACCAAGAGGAGGCTGTCGACCGCGGATGACGTCAGTGCCGGATCCGAATTGGAAGTTTCCGTGTCCGAATTGATTGAAAACTCCGTCAGAAAGAAAAAAAAGAACGAGACGAAGAAGAAGAAACCACTTGATCAAGAGAGTGTAAATGAGTGTGATATTCACGAGGACTCTGACAGGGGAATGATGAGCGTGAACGGTGTCAAGAAGGGTTCAGGAGTTGAAGATAAGAAACAAATGGGTAGCAAAAGCAACGAGGGTGGAAGTTTGATGTGTCATCAGTGCCAGAGGAATGATAAGAGTGGAGTTGTCTTTTGCTCAAAGTGCAACAGAAAACGCTACTGTTATGAATGCCTTGAGCGGTGGTACCCAGGTAAAACCCTGAAGGAAGTTGAGGAAGCATGTCCATTCTGTTTAGGCAATTGCAATTGCAAAGCCTGCTTGCGGGAGGTTCCGGTGCTTATGGACCGAGAGGTAAATTCCAGTGTCAAATTAAATCGACTGCGCTACTTACTCTATAAAGCCTTGCCTGTTCTGAGGCATATTCACAGGGAGCAAAGCTTAGAACTAGAGATTGAATCTAAAATAAGAGGTGAGCAACTGCAAGAAAAAGGCATAGCAAGAACAGAGCTAGACAAACGTGAGCGCTTATACTGTGACAATTGCAATACATCTATAATTGGGTTTTACCGGAGCTGCCCCAATCCCAGTTGCTCTTATGATCTATGTCTCATGTGTTGTCAAGAGCTTAGGGAGGGTTGCCAACCTGGAGGCATAGAAGCTGAAACATCCCAGGAACAATTTTCTGAGAGAGCTCGTAATCATGATTCATCAATAACTAAGAGTAAAAAACAAAGTAAAAGATATGGATGGGAGAGCCAGCTTGTGCCTACAAATTTTGATTTTCAAGCTGACATGTCCACCCCCTTCCCTGAATGGAATGCTAATACAGATGGTAACATTCCATGTCCACCAAAACAGCGTGGAGGATGTGGTACCACATTGCTAGAATTGAGACGTACTTTCAAATGTAACTGGGTAGTGAAATTGCTAAATAATGCTGAGGACCTCACCAGAGACTACACACCGCCTAATGTTGATATTACTGAAAAGTGCTCTTTATGTCAGATAAATACTATTGAAGGAAAAACCAATCTTGAAGCACGTAGGGCAGCATTCAGAGATGATGATAATGATAATTTCATATATAGCTCAAATGCCCGTGATATTTCTGATGATGAAATTGAGCATTTCCAGAGGCACTGGATGAGGGGAGAACCTGTTGTTGTGAGAAACATTCTAGATAAGACATCGGGTCTTAGCTGGGAGCCAATGGTTATGTGGAGGGCTTTAAGAGAAACAGGCTCCAAAGTGAAGTTTAAAGACGAAACTCGAAGTGTAAAAGCTATTGATTGCTTCGATTGGTGTGGGGTTGAGATCAATATTCACCAATTTTTCCAAGGCTACCTAGAAGGTCGAATGTATAACAATGGGTGGCCAGAAATGCTGAAATTGAAAGATTGGCCCACATCCACCACTTTTGAAGAGCGCTTGCCTAGGCATGGCACAGAGTTCCTCATGGCACTCCCCTACAGGGATTACACTGATCCAAAATCTGGGACTTTGAATTTTGCCTCTAAACTTCCTGATGACTCACTAAAGCCGGATTTAGGACCTAAAACATATATTGCTTATGGATTTTCTGATGAGCTTGGTAGAGGAGATTCTGTGACAAAGCTGCACTGTGATGTGTCAGATGCAGTCAATGTGTTGATGCATACAACCAAAGTGGAGATAGCTCCTTGGCGGAGAAAAATAATAAAAGAATTGCAGAAAAAATATGCCGAAGAAGACTCTCGTGAACTTTTATGTGAAGCTTTAGGAGATGCTGATGAAAGACCTAAATCTGAAGCATTGAGCCATGATCAGAAGGCAGACATTGGAATTGGTAATATTTCACCAACTAGCCACGTGGATCAGTGCATTCCATCTATATGTGAAGAAGGCAAGAGTCAGAAGTTAGAAACACATGATCTATCTGCAAGTAGCTTAGCTAGTAATATGAGCAATAAGGAAGACAGAATGAGGATTGATTTTATAGATGATAAGGAGCCTGATGGTCCTGAGCTGAGAGAGTCAAAACAAGGCCTGGAGAAAGATACTTTGCAAACTGAAGATGGAGCTGAGGTTGCCCTCGGTGGTGCTGTTTGGGACATCTTCCGCCGGCAAGATGTCCCTAAGCTAATTGAGTACTTAAGAAAGCACAAGAATGAATTCCGTCATATAAAAAATCATCCTGTAGATTCTGTTATACATCCTATTCATGATCAAACTCTGTTTTTAAATGAGAGGCATAAGAAACAGCTGAAAAAGGAGTTCAATGTTGAACCATGGACCTTTGAGCAACACCTTGGGGAGGCTGTCTTCATTCCAGCAGGATGTCCTCATCAAGTGAGAAACAGACAATGCCTATTAATTGGTGCTTTCATTGAGAGGAAATGGAGCCATGGCCCACGGAATCCGTTTGACCCGACTGGAGGAACTCACCTTGTCCAACACACAGGAGGTAACCACTCTTAA 2760 0.4366 MTESPSDRRCKRTAGPNWRCSGVASLGKSFCEKHLQQRALQDQKRRIKRNEGNESERRSNKTKRRLSTADDVSAGSELEVSVSELIENSVRKKKKNETKKKKPLDQESVNECDIHEDSDRGMMSVNGVKKGSGVEDKKQMGSKSNEGGSLMCHQCQRNDKSGVVFCSKCNRKRYCYECLERWYPGKTLKEVEEACPFCLGNCNCKACLREVPVLMDREVNSSVKLNRLRYLLYKALPVLRHIHREQSLELEIESKIRGEQLQEKGIARTELDKRERLYCDNCNTSIIGFYRSCPNPSCSYDLCLMCCQELREGCQPGGIEAETSQEQFSERARNHDSSITKSKKQSKRYGWESQLVPTNFDFQADMSTPFPEWNANTDGNIPCPPKQRGGCGTTLLELRRTFKCNWVVKLLNNAEDLTRDYTPPNVDITEKCSLCQINTIEGKTNLEARRAAFRDDDNDNFIYSSNARDISDDEIEHFQRHWMRGEPVVVRNILDKTSGLSWEPMVMWRALRETGSKVKFKDETRSVKAIDCFDWCGVEINIHQFFQGYLEGRMYNNGWPEMLKLKDWPTSTTFEERLPRHGTEFLMALPYRDYTDPKSGTLNFASKLPDDSLKPDLGPKTYIAYGFSDELGRGDSVTKLHCDVSDAVNVLMHTTKVEIAPWRRKIIKELQKKYAEEDSRELLCEALGDADERPKSEALSHDQKADIGIGNISPTSHVDQCIPSICEEGKSQKLETHDLSASSLASNMSNKEDRMRIDFIDDKEPDGPELRESKQGLEKDTLQTEDGAEVALGGAVWDIFRRQDVPKLIEYLRKHKNEFRHIKNHPVDSVIHPIHDQTLFLNERHKKQLKKEFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQCLLIGAFIERKWSHGPRNPFDPTGGTHLVQHTGGNHS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00192 919 SUPERFAMILY Clavaminate synthase-like 474 881 - -
Adu06g00192 919 MobiDBLite consensus disorder prediction 326 345 - -
Adu06g00192 919 ProSiteProfiles JmjC domain profile. 597 907 IPR003347 -
Adu06g00192 919 Pfam WRC 7 44 IPR014977 -
Adu06g00192 919 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 17 746 IPR045109 GO:0032454|GO:0033169
Adu06g00192 919 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 774 883 IPR045109 GO:0032454|GO:0033169
Adu06g00192 919 MobiDBLite consensus disorder prediction 897 919 - -
Adu06g00192 919 MobiDBLite consensus disorder prediction 37 74 - -
Adu06g00192 919 MobiDBLite consensus disorder prediction 90 145 - -
Adu06g00192 919 ProSiteProfiles WRC domain profile. 4 52 IPR014977 -
Adu06g00192 919 SMART cupin_9 578 895 IPR003347 -
Adu06g00192 919 Pfam JmjC domain, hydroxylase 792 881 IPR003347 -
Adu06g00192 919 MobiDBLite consensus disorder prediction 761 781 - -
Adu06g00192 919 Gene3D Cupin 462 886 - -
Adu06g00192 919 ProSiteProfiles Zinc finger RING-type profile. 152 198 IPR001841 -
Adu06g00192 919 MobiDBLite consensus disorder prediction 324 345 - -
Adu06g00192 919 MobiDBLite consensus disorder prediction 100 123 - -
Adu06g00192 919 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 774 883 - -
Adu06g00192 919 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 17 746 - -
Adu06g00192 919 MobiDBLite consensus disorder prediction 37 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00192 Adu-Chr6 2359440 2366050 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu06g00192 JmjC 1.6e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00192 K15601 - mnt:21406261 987.638