Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00185 ATGGCGAATCTGGAGTGCAATCTGAGGGGACCTCCCACTCCTACAGCTCAAACAGTTTGGATAGGTGAGGGAGATGAAGATCTCTACACAGAGCTATGGAAGCTGTGTGCAGGGCCTCTCGTGGATGTTCCCCGCACTGGGGAGAGAGTCTACTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCAACGAATCAGGAGGTGAACCAAGAACTGAGTCAGCAAATCCCTCATTTCAATCTTCCAACCAAGATTCTCTGCCGTGTTGTTCACATTCAGTTGCTGGCGGAACAGGAAACTGATGAAGTTTATGCCCGTATCACTTTGCTTCCAGAACCAGATCAAAAAGAGCCTACAATCCCTGATCCAAGTCCCGTGGAATCTCAAAGAGAAACGTTTCACTCTTTTAGCAAGATATTAACTCCCTCTGATACTAGCACACATGGAGGATGTTCAATTCGGCGTATGCATGCCACAGAGTGCCTACCTCCATTGCCATCACCTCCATCGGATGCAGATGAAAATTCCCCACCACCATCCCAGGAGTTGGTGGCGAAGGATCTTCATGGGTTCGAGTGGAAGTTTAAGCATGTATTAAGAGGTTCACCAAAGAGGCACTTGTTCACAACTGGCTGGAGTACTTTTGTCACTTCCAAAAGACTGGTTGCTGGAGATGCTTTTGTGTTTTTAAGGGGAGAAGATGGGGAAATGAGAGTTGGGATTAGGCGTCTTGCGCGGCAGCAGATCCCAATGCCTTCGTCCGTGATATCAAGCCAGAGTATGCATCTTGGAGTGCTTGCCACTGCTTCCCATGCTGTTATGACTCGCACCATGTTTGTGGTTTATTATAAACCAAGGAGTAGCCAGTTTATTATTGGCCTTAACAAATATCTGGAAGCAGTCAAAAATAAATTTACTGCTGGAATGCGTTACAAGATGAGGTTTGAAGTGGAAGAATCACCTGAGAGAAGATTTTCTGGTACTATTGTTGGGGTTGGGGATGTATCGCCAGGATGGTCAAACTCTCAATGGCGTTCCTTGAAGGTTCATTGGGATGAGCCGGCAACGTTTCCGAGACCAGAGAGGGTTTCTGCTTGGGAGATAGAGCCTTTTGTTGTCTCTACTGCGTTGGCCAAAAGGCCCAGGCATGCTGATCATACTTCATCATCTGAAATTGCTTCCAACACCCCTGCTTCTGCTTTTTGGTTTCATGGATCATCCATGTCCCATGATCCTGCAGAATTAGGTGGTGCTGAAGTCCAATGCAAGGAAAACCAGGTTGTATGGTCCTTGAGGCAGAAAGAAACCAATGGCAATCCCATGAATAGCCACTCCAGTAGCTCTCGGGTTCGTATGGAAGGAATATGGTCTAATTCACCACATGTGAGTGTCCCACCAAACCCCCCAAACAACAATGCTGCTGCAAAACAAGGCCTTTCACCTATTTCATCTAAACCGAATGATGATGGTTTGACTCATGATAAAGTTGAAGTAGATGGTAGAAAGAAGACTGAGAATCCCACCAAGATCTTTTTATTTGGAGTTAATTTGACTAACAACTTCCGTAGTAATGTGTCCCTTCCGGAGAAAGAACAGGCTTGCTCTGCCATTGTTCCCATTGGTCCCAAAGAATCTACTCCCATTACCATTACTGCATCAGCCACTCAGAATGCTCAGAATTCCAACTATTCAGTGTCCGATAAGGAGCAACAGAACCAAATTTCTTCTGATGTATTGCCAGCAGAGAAGCCTAGCAAGCTGGCATCCTTACCATCCATGAGGACTCGAACTAAGGTGCAAATGCAAGGTGTAGCTGTAGGGAGAGCTGTGGACCTAACCATGTTGAATGGCTATGACGAGCTTACAATTGAGCTTGAGAAACTGTTTCATATTGAGGGAGAACTCCGATCACAAAACAAATGGGCAGTTACTTTTACTGATGATGAAAATGACATGATGCTTGTTGGTGATGATCCATGGCCGGAGTTCTGCAACATTGTGAAACGGATTTACATTTATTCAAGGGAGGATGTGAAGAAGATGAAGTATAAACTCTCCGTGCCTTCGTCGGACTGCGAAGAGACTTTGTTGTCGAAAGAAGAGACTTAA 2112 0.456 MANLECNLRGPPTPTAQTVWIGEGDEDLYTELWKLCAGPLVDVPRTGERVYYFPQGHMEQLQASTNQEVNQELSQQIPHFNLPTKILCRVVHIQLLAEQETDEVYARITLLPEPDQKEPTIPDPSPVESQRETFHSFSKILTPSDTSTHGGCSIRRMHATECLPPLPSPPSDADENSPPPSQELVAKDLHGFEWKFKHVLRGSPKRHLFTTGWSTFVTSKRLVAGDAFVFLRGEDGEMRVGIRRLARQQIPMPSSVISSQSMHLGVLATASHAVMTRTMFVVYYKPRSSQFIIGLNKYLEAVKNKFTAGMRYKMRFEVEESPERRFSGTIVGVGDVSPGWSNSQWRSLKVHWDEPATFPRPERVSAWEIEPFVVSTALAKRPRHADHTSSSEIASNTPASAFWFHGSSMSHDPAELGGAEVQCKENQVVWSLRQKETNGNPMNSHSSSSRVRMEGIWSNSPHVSVPPNPPNNNAAAKQGLSPISSKPNDDGLTHDKVEVDGRKKTENPTKIFLFGVNLTNNFRSNVSLPEKEQACSAIVPIGPKESTPITITASATQNAQNSNYSVSDKEQQNQISSDVLPAEKPSKLASLPSMRTRTKVQMQGVAVGRAVDLTMLNGYDELTIELEKLFHIEGELRSQNKWAVTFTDDENDMMLVGDDPWPEFCNIVKRIYIYSREDVKKMKYKLSVPSSDCEETLLSKEET 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00185 703 SMART B3_2 137 246 IPR003340 GO:0003677
Adu06g00185 703 Gene3D - 305 377 - -
Adu06g00185 703 Gene3D - 591 683 - -
Adu06g00185 703 ProSiteProfiles PB1 domain profile. 595 678 IPR000270 GO:0005515
Adu06g00185 703 ProSiteProfiles B3 DNA-binding domain profile. 137 246 IPR003340 GO:0003677
Adu06g00185 703 Pfam Auxin response factor 270 349 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu06g00185 703 PANTHER AUXIN RESPONSE FACTOR 11 15 688 - -
Adu06g00185 703 MobiDBLite consensus disorder prediction 469 488 - -
Adu06g00185 703 SUPERFAMILY CAD & PB1 domains 590 671 - -
Adu06g00185 703 MobiDBLite consensus disorder prediction 160 182 - -
Adu06g00185 703 Pfam AUX/IAA family 583 677 IPR033389 -
Adu06g00185 703 Gene3D - 134 245 IPR015300 -
Adu06g00185 703 SUPERFAMILY DNA-binding pseudobarrel domain 128 273 IPR015300 -
Adu06g00185 703 CDD B3_DNA 135 244 IPR003340 GO:0003677
Adu06g00185 703 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 688 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu06g00185 703 Pfam B3 DNA binding domain 137 244 IPR003340 GO:0003677
Adu06g00185 703 MobiDBLite consensus disorder prediction 458 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00185 Adu-Chr6 2182763 2187113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00185 24 682 B3 DNA Binding Superfamily AT4G23980 53.073 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu06g00185 B3 1.5e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00185 K14486 - gmx:100820503 863.218