Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00174 ATGGATTCTGATTCTGTGTTGGCATTGCCTGAGAGCAATGGATTCAAAACAAGGGACAGTCATGATTTTGAGGAAGACTTTGTAGAGAAAGATCCTACCGGCCGCTATCTTAGATACAATGAAATGTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGGGGCTTTGATGAAGTTGACGGATTAGAAGTTGCTTGGAACCAAGTCAGGATTGATGAACTCCTGGGATCTGCAGATGACGTTGCGAAGTTGTACTCCGAAGTAAACCTATTGAAGTCTGTGAACCACGAAAACATCATTAAGTTCTATAATTCTTGGATTGATGATAAGAAGAAAACTGTTAACATTATTACTGAGCTCTTCACATCTGGAAACCTAAGACAATACCGGAAGAAGCATAGATATGTTGACATGAAAGCCATAAAAGGTTGGGCTCGACAAATTCTTCAAGGTCTGGTATATCTTCACGGTCACAAGCCGCCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTAAATGGGAACCATGGAGAAGTCAAGATCGGAGATCTCGGTTTGGCAACTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACCCCCGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTCGTGGATGTCTATTCTTTTGGGATGTGCATGTTGGAAATGGTTACTTTTGAGTACCCGTATAGCGAATGCAAGAATCCAGCTCAAATTTACAAGAAAGTTACCTCTGGCATCAAACCGAATTCCCTTAACAGGGTGAGTGATCCCCAAATTAAGGAGTTTATCAACAAATGTCTTGTTCCTGCATCTGAGAGGTTGTCTGCAGAGGAGCTTCTTAGAGACCCATTTCTGCAAGTCGAGTGTTCCAAGGATCCAATCCTTAATCCCTTAAACTCACCTACTAAATCTCCAAAGGCTATAGATAAGCCGAAATCTGGTCCTTTGTCTATAGACTTCGAGGCTGACTCCAAACATGTGTCTGTGATTACCTGTGCTGAAAACAGCCATGGAAGTTCACATTGTCCACTTCTGGAAGTTCGGCGTACATATAAAAACAATGAGTTTAAATTGAAAGGGACCAAAAATGATGATATCACGGTGTCATTAATCTTGCGTATTGCTGATTCTTGTGGTCAAGTAAGGAATATACATTTCCTCTTCTACCTTGAGACAGATACTGCAGTTTCTGTGGCATCAGAGATGGTTGAAAATTTGGAGCTGTCCGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATAATGAAGCTATTACCTCGGTGTAAGCCGCCGAATGAAGGAAATAGTCATAGTCAGTGTCCTGTGCCAAGCAGTCCTCGCACTGAAGTGATTTTTGATCAAGACAACGCACAGCGTCCTGTCCAAACCAATGTTCCCTCTGAATTGGTTTTCAGTCCTGTCCAAACCAATGCTCCCTCTGAATTGGTTTTCAATCAAGAGAACTCGACTCCAGTTGATTCTAACCAAGCAGAAGATTTTGAGACAGCCAACAGAAGCTTTGTGTTTAACAATGGTGATAATGCTGCTTTTGTTGGTGAGTATAATTCTTCTCCAAGTTTGAGTAGCTTGGAAGATCAAGATTGGCAAGAACCGGCAGAGGCTGATATAGCCATTGAAGATGCTTGCATGAAAAATGAATACTGTCTTGATTCTGACGCTGATAGGAGTGAGAAGGGATTAAGTTGGTCAACCTTAGAAATGAAGCTGGCTGATACATTCTGGGAATGTTGTAAATTGCAGGCTACAAACTGTGCTGCAGAAAGCATTGTGCTGAAAGGAATCTCAAAGAACTCTTCTCACTCTACAATCCCAGCCTTTTGGGGAACACCTAATGCTTTGAGCTTGACAAGCAGCAATTCTTCTTGGTCTCCAACCGACAAAGACATCGAGCACGAGCTAAAGCATGAACTCGATGCGATCGAATTACACTATGAGCTTTGGTTCCAAGAACTTTCAAGACAGAAGTTGGAAGCATTGGAAGCCACCAGAAAGAAATGGACAGAAAGGAAGAAACTGATTGTTCATTGA 2085 0.4182 MDSDSVLALPESNGFKTRDSHDFEEDFVEKDPTGRYLRYNEMLGKGAFKTVYRGFDEVDGLEVAWNQVRIDELLGSADDVAKLYSEVNLLKSVNHENIIKFYNSWIDDKKKTVNIITELFTSGNLRQYRKKHRYVDMKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPNSLNRVSDPQIKEFINKCLVPASERLSAEELLRDPFLQVECSKDPILNPLNSPTKSPKAIDKPKSGPLSIDFEADSKHVSVITCAENSHGSSHCPLLEVRRTYKNNEFKLKGTKNDDITVSLILRIADSCGQVRNIHFLFYLETDTAVSVASEMVENLELSDHDVAFIAELIDYLIMKLLPRCKPPNEGNSHSQCPVPSSPRTEVIFDQDNAQRPVQTNVPSELVFSPVQTNAPSELVFNQENSTPVDSNQAEDFETANRSFVFNNGDNAAFVGEYNSSPSLSSLEDQDWQEPAEADIAIEDACMKNEYCLDSDADRSEKGLSWSTLEMKLADTFWECCKLQATNCAAESIVLKGISKNSSHSTIPAFWGTPNALSLTSSNSSWSPTDKDIEHELKHELDAIELHYELWFQELSRQKLEALEATRKKWTERKKLIVH 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00174 694 Coils Coil 668 688 - -
Adu06g00174 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Adu06g00174 694 Gene3D - 375 454 - -
Adu06g00174 694 SMART serkin_6 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00174 694 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
Adu06g00174 694 CDD STKc_WNK 35 294 - -
Adu06g00174 694 SUPERFAMILY Protein kinase-like (PK-like) 38 295 IPR011009 -
Adu06g00174 694 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 694 - -
Adu06g00174 694 Gene3D Transferase(Phosphotransferase) domain 1 120 300 - -
Adu06g00174 694 PANTHER KINASE DOMAIN PROTEIN 5 694 - -
Adu06g00174 694 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00174 694 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 433 IPR024678 GO:0004674|GO:0005524
Adu06g00174 694 ProSiteProfiles Protein kinase domain profile. 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00174 Adu-Chr6 2031440 2034501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00174 24 444 MAP Kinase Kinase Kinase AT1G64630 60.570 8.87e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Adu06g00174 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00174 K08867 - gmx:100809602 823.157