Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00146 ATGCTCCCCATTGTAACGGAAGCCACCGCCAGCGTGTTATCCTGCTGCTGTTGTTTCGCCGCGTCGTCACTGTCCTCGTGTGTCGGCGAGTTTTGCAGCGATGCTAGTCTGTGTCTCTTGTGGCCATTCTTGAGTGGAGGGGGAATCGCATTGCAGTTGCGGCGCGCACCAAATTTTCGTTGCAGAGAAACCACTCTTCACTCTACCTTCTCCAATTTCCTTTTATCCGGTGTGAAAATGTCGATTGCTGAGGCTGCTTGCAGTTACGCCGTTATGATCCTTCACGACGACAAACTCCCTGTCACTGCTGAAAATATCTCATCCTTGTTGAAAAGTGCCAAGGTATCAGTTGAGTCATACTGGCCCAGCTTATTTGCTAAACTCGCTGAGAAGAGAAATGTTGAGGATTTGATAGCCAGCGGTGGAGGAGGTGGGGCTCCAGTTGCTGTTGCAGCCGCCCCTGCTGCCGCTGCCGGTGGTGGTGGTGGTGCAGCAGCAGCTCCTGCAGCTGAGGAGAAGAAGAAGGAAGAACCCCAAGAAGAGAGTGATGATGATATGGGATTCAGCTTATTCGACTAG 579 0.5199 MLPIVTEATASVLSCCCCFAASSLSSCVGEFCSDASLCLLWPFLSGGGIALQLRRAPNFRCRETTLHSTFSNFLLSGVKMSIAEAACSYAVMILHDDKLPVTAENISSLLKSAKVSVESYWPSLFAKLAEKRNVEDLIASGGGGGAPVAVAAAPAAAAGGGGGAAAAPAAEEKKKEEPQEESDDDMGFSLFD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00146 192 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 80 185 - -
Adu06g00146 192 MobiDBLite consensus disorder prediction 157 192 - -
Adu06g00146 192 Pfam 60s Acidic ribosomal protein 101 191 - -
Adu06g00146 192 CDD Ribosomal_P1 84 139 - -
Adu06g00146 192 Gene3D - 80 142 IPR038716 -
Adu06g00146 192 Hamap 50S ribosomal protein L12 [rpl12]. 85 192 IPR027534 GO:0003735|GO:0005840|GO:0006414
Adu06g00146 192 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN 80 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00146 Adu-Chr6 1732246 1737029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00146 80 192 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 51.724 5.00e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00146 K02942 - ncol:116248277 123.635