Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00143 ATGCAAATGCAGGAGGAGCAGATCATGAAGCTGAAGGACGAGAATGCGCCACCGGGGGACGTGGTGGTTAGGTGGGAGAAGTTTCTCCCTCGGATGGCGCTCAGAGTGTTGCTTGTTGAAGCCGATGATTCTACACGCCAGATCATATCCGCCCTTCTCCGAAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCCTAAAGGCATGGGAGACATTGAAGAGCAAAGCACCTGAGATTGATCTTATATTAACAGAAGTGGAGTTGCCGTCAATATCTGGATTTTCACTTCTCACGTTGATAATGGAGCATGACATTTGCAAAACCATTCCCGTCATAATGATGTCTACTAATGATTCAATTAGCATGGTATTCAAATGCATGCTGAAAGGTGCGGCTGATTTTCTTATAAAACCCATTCGAAGGAATGAGCTACGGAACTTATGGCAGCACGTATGGAGAAGGCATGCTATTAGCGGGTCCCATCAGAGTTTAACACTGCCGCAGAATAAATTTGAAGTTGCTGCAGAAAACAATGCTACGAGCAATAATTCTAGTGGTTCTGTGGCTTCCCCACAGAAAAATAGAGAGTACAGTGGTGAGAAAGCAAGTGATGCTCAAGTTACGTCCCCGTTGAAAAGTTTCTCAAAGTTGATCAATATTGACACAGTGAAGCATGAAGAGGCTACCAAATTTGAAAGGGAATCAGCTACGCACTATAGTGAATCCGGTGAGAAATCAAATATGTTTGTATCCGATGCTACAAGGTGCTACAAAACTCTTAATGCGACAGGTGTAAGGCTAGATCAAGGCTTTGATTGTGATGAAACAGAAAATGAAGATGAAGTTTTAAGAACAGAATTAAGCAAAGCCCATTCTCATATTAATACCGAGATTAACAAATGCAATGATACACTGGTAGAACCTTCTACAGGGGCAATTGACTTGATTGCTACATTTGAGAATTCTCCAAAGAGCACGGGTGAAAATTGTAGTTTCAATGCTGACAACACATTCAAGTCAGTTTTTGATACACAATTGGGACTTTCTTTAAGAAGAGATTCTCCTAGTAGCTCATGTAAGCTTGCACCGGAAGAAAGGAAAATATTGAACCATTCAACTGCATCGGCCTTTTCTTGGTATAGCAGCAGTAAGTTGTTGCAGCCCCTTTTCCCATCTCAATCAATTACTTCTGCTAAACTATCAAGTGTCAGTTGTAATTCTCATGAATCCCATAAGTCATCTGAAAATACACATACTCATCATCAGCATGGTGATAAAATTCAAGATAAACAGAACATGACCACTTTGGTCACTCAGACTGGCCAAATTGAACCAAAATCACCAAACGATGAACTTGGATTCTCTTGTGCTACTGGTGTTTCTTCTGATCATAACTCTATGGGGAATGCCAATGCTTTCCCTCGTATGCCCTGTGCACAATCAGCTGTGCATCCCATATGGACTCCGAAACCAGTGTCCAAGAAAGAAAATTCTTCATTTCCCACTAGTGCTTCTTCTCATTCCAACCCTGAAACTGACAATTCAGAATGTCATCGATGCTCGGATGATGCCACCTACACTTCTGATCAAAATGGAAATGATCAAAGCAAGATGGATTGTGTTAGGCATGACTCTGCTGCTGCTGCTGGTCAGAGTGCAAGTACTAGTTTTTACCTTGAAAATCATAATAGCAGCGGTGCATATGGAAGCATAGGCAGCGGAAGTGATGCAAATGCTACTTCAGCTGTGGTAACTAAGAACAACCCCTTTGCTGATAGTAGTCAACATAGTCATGATGGATTCAGAGGGACAGATTCTCATCGGAGCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGGCTGAAGAGGAAGGAGAGATGCTACGAGAAGAAGGTACTGCAACCATGCTGTTCGATATCAGAGCCGGAAAAGACTGGCAGAGCAGCGCCCTAG 1956 0.4264 MQMQEEQIMKLKDENAPPGDVVVRWEKFLPRMALRVLLVEADDSTRQIISALLRKCSYKVAAVPDGLKAWETLKSKAPEIDLILTEVELPSISGFSLLTLIMEHDICKTIPVIMMSTNDSISMVFKCMLKGAADFLIKPIRRNELRNLWQHVWRRHAISGSHQSLTLPQNKFEVAAENNATSNNSSGSVASPQKNREYSGEKASDAQVTSPLKSFSKLINIDTVKHEEATKFERESATHYSESGEKSNMFVSDATRCYKTLNATGVRLDQGFDCDETENEDEVLRTELSKAHSHINTEINKCNDTLVEPSTGAIDLIATFENSPKSTGENCSFNADNTFKSVFDTQLGLSLRRDSPSSSCKLAPEERKILNHSTASAFSWYSSSKLLQPLFPSQSITSAKLSSVSCNSHESHKSSENTHTHHQHGDKIQDKQNMTTLVTQTGQIEPKSPNDELGFSCATGVSSDHNSMGNANAFPRMPCAQSAVHPIWTPKPVSKKENSSFPTSASSHSNPETDNSECHRCSDDATYTSDQNGNDQSKMDCVRHDSAAAAGQSASTSFYLENHNSSGAYGSIGSGSDANATSAVVTKNNPFADSSQHSHDGFRGTDSHRSSQREAALTKFRLKRKERCYEKKVLQPCCSISEPEKTGRAAP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00143 651 MobiDBLite consensus disorder prediction 490 518 - -
Adu06g00143 651 PANTHER PRR RESPONSE REGULATOR 211 641 - -
Adu06g00143 651 PANTHER PRR RESPONSE REGULATOR 26 213 - -
Adu06g00143 651 MobiDBLite consensus disorder prediction 412 429 - -
Adu06g00143 651 CDD psREC_PRR 36 139 - -
Adu06g00143 651 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Adu06g00143 651 SUPERFAMILY CheY-like 34 163 IPR011006 -
Adu06g00143 651 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
Adu06g00143 651 MobiDBLite consensus disorder prediction 493 512 - -
Adu06g00143 651 MobiDBLite consensus disorder prediction 599 616 - -
Adu06g00143 651 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 213 IPR045279 GO:0009736
Adu06g00143 651 PANTHER TWO-COMPONENT RESPONSE REGULATOR 211 641 IPR045279 GO:0009736
Adu06g00143 651 MobiDBLite consensus disorder prediction 407 432 - -
Adu06g00143 651 MobiDBLite consensus disorder prediction 590 616 - -
Adu06g00143 651 MobiDBLite consensus disorder prediction 179 206 - -
Adu06g00143 651 Gene3D - 32 263 - -
Adu06g00143 651 SMART REC_2 34 149 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00143 Adu-Chr6 1706159 1710869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00143 608 633 Response Regulator Gene Family AT5G24470 80.769 3.00e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g00143 Response_reg 1.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00143 K12130 - gmx:100779346 746.888