Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00141 ATGGAAGCACAAGTCATTGAAATCAGTGGAGATCTTCCTGACTTAGGAAGGAAGAACGGAGGAGTAAGTAGAAAAATTTGTGGGGAAGCAGCATGTGGGTTCTCTAAGGATTCGGAAGAGAGATCAGCTTCGATGCGAAAGCTTTTAATAGCAGTGGTGCTTTGTGTTATTTTCATGAGCGTTGAAGTAGTTGGAGGGATCAAAGCAAATAGTCTGGCAATATTAACTGATGCAGCACATTTGGTTTCAGATGTTGCAGCATTCGCAATCTCTTTGTTTTCTTTATGGGCTGCTGGATGGGAATCCAATCCTCGCCAATCATACGGGTTTTTCAGGATAGAGATTCTCGGTGCTCTGCTTTCTATCCAGTTGATATGGTTGCTTGCTGGGATTCTAGTGTATGAAGCCATTCAGAGAATTATTTCAGGGACTCGTGAGGTCAATGGCTTCTTAATGTTCCTCGTTGCTGCATTTGGTTTAGTTGTTAACATCATTATGGCTTTCTTATTGGGTCATGATCATAATCATCATCACACAAAACATACAAAAGATGATTCTACACAGCTTCTTGGGGAATCCAAAAATGTGAATGTGCAGGGGGCTTATCTGCATGTACTTGGAGATTCTATACAGAGTGTGGGGGTAATGATTGGTGGAGGAATCATATGGTGGAAGCCGGAGTGGCAAATAGTTGACTTAATTTGCACTCTAGTATTTTCGGTAATTGTTTTGGGGACAACTATAAAGATGCTGAGGAACATTCTGGAAGTTCTGATGGAGAGCACGCCGCGTGAAATAGACGCGGCGGAGGTCCAAAGGGGGCTGCTGGAGATGGAAGAAGTGTTGGCTGTTCATGAGTTGCATATTTGGGCCATCACTGTTGGGAAGGTTTTGCTGGCTTGCCATGTTATAGTTAGGCCAGAAGTGAATGCAGACATGGTGCTGGACAAGCATCACTCACGCATTATACGGAATGTTGGTCACCCTTCCATTCCCACTCCCACTCACTTATTATCAATACTCTTGCTTAGCTTTAATTTGATGGAGAGGCTTCAGCTTCAAGGACCCCTTGACTCCTCTTTGTTTGGTGAGCACCTAGAAGTGAATTGCTTGGAACAAGGTTTTGTCGATAGAGAGAGTAACTTCAAAGTCAAGGAGGATGAACATGAAGAACAAACTTTGATATCAAGCTTGGAGGGTAACATGCCATTCCTTCAGATGCTTCAAAGCGTGGAATCCCCGCAGCATCTTAAGAAACCATGGGAAGGGACGCCCTACATACCCACATTGGAATCCGAAATCAATGAATTTGAACAGTACACACGTTCAGGCAGTGATGCTGCTACCAGGTTATCGAAACATCATCATCAGGAACGGGTGAGGAAGAGGAAGAGAGGAAGAGAAAGTAAAGACAAGGACAAGGAAGAGGTTGAGAACCAGCGCATGACCCACATTGCTGTGGAACGCAATAGGCGGCGCCAAATGAATGAGCATCTCAGTGTTCTAAAGTCTCTCATGCACCCTTCCTATATTCAAAGGGGTGACCATGCATCAATCATAGGGGGTGCAATAGATTTTGTGAAGGAATTGGAGCAGTTAGTTGAATCCCTTGAGGCCCAAAGAAGGATGAGAAACAAGGAAGAAGAGGATGGTGGGAAAGAAGAAGCAAGTGGTGGGAATGAGGCTAAGGCAGAGAGAAGGTCAAAGGTGGGAGGCATTGAGGTGAGTGTGATTCAAAGCCATGTCAACTTGAGAATTCAGTGCGAGAAGAGAGCAGGGCTATTGATAAATGCAATCGTTGCATTGGAGAACCTAAGGCTCCCTATTCTTCATCTCAACATCACATCCTCAGATTCTTCAGTTCTCTATTCTTTCAGTCTCAAGATTGAAGAAGACAGCAAGTTAGGGTCAGCAAATGAAATTGCAGAGGCAGTTGATAAGATATTGACTTCATTAAGACATTAA 1965 0.4392 MEAQVIEISGDLPDLGRKNGGVSRKICGEAACGFSKDSEERSASMRKLLIAVVLCVIFMSVEVVGGIKANSLAILTDAAHLVSDVAAFAISLFSLWAAGWESNPRQSYGFFRIEILGALLSIQLIWLLAGILVYEAIQRIISGTREVNGFLMFLVAAFGLVVNIIMAFLLGHDHNHHHTKHTKDDSTQLLGESKNVNVQGAYLHVLGDSIQSVGVMIGGGIIWWKPEWQIVDLICTLVFSVIVLGTTIKMLRNILEVLMESTPREIDAAEVQRGLLEMEEVLAVHELHIWAITVGKVLLACHVIVRPEVNADMVLDKHHSRIIRNVGHPSIPTPTHLLSILLLSFNLMERLQLQGPLDSSLFGEHLEVNCLEQGFVDRESNFKVKEDEHEEQTLISSLEGNMPFLQMLQSVESPQHLKKPWEGTPYIPTLESEINEFEQYTRSGSDAATRLSKHHHQERVRKRKRGRESKDKDKEEVENQRMTHIAVERNRRRQMNEHLSVLKSLMHPSYIQRGDHASIIGGAIDFVKELEQLVESLEAQRRMRNKEEEDGGKEEASGGNEAKAERRSKVGGIEVSVIQSHVNLRIQCEKRAGLLINAIVALENLRLPILHLNITSSDSSVLYSFSLKIEEDSKLGSANEIAEAVDKILTSLRH 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00141 654 SMART finulus 485 536 IPR011598 GO:0046983
Adu06g00141 654 Pfam Helix-loop-helix DNA-binding domain 480 531 IPR011598 GO:0046983
Adu06g00141 654 MobiDBLite consensus disorder prediction 468 483 - -
Adu06g00141 654 PANTHER METAL TOLERANCE PROTEIN A1 192 324 - -
Adu06g00141 654 CDD bHLH_AtFAMA_like 482 544 - -
Adu06g00141 654 Gene3D Cation efflux protein transmembrane domain 44 258 IPR027469 -
Adu06g00141 654 TIGRFAM CDF: cation diffusion facilitator family transporter 45 325 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Adu06g00141 654 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 479 545 IPR036638 GO:0046983
Adu06g00141 654 MobiDBLite consensus disorder prediction 541 567 - -
Adu06g00141 654 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 3 181 - -
Adu06g00141 654 SUPERFAMILY Cation efflux protein transmembrane domain-like 42 260 IPR027469 -
Adu06g00141 654 Gene3D - 477 551 IPR036638 GO:0046983
Adu06g00141 654 PANTHER METAL TOLERANCE PROTEIN A1 3 181 - -
Adu06g00141 654 Coils Coil 527 550 - -
Adu06g00141 654 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 479 530 IPR011598 GO:0046983
Adu06g00141 654 MobiDBLite consensus disorder prediction 441 483 - -
Adu06g00141 654 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 192 324 - -
Adu06g00141 654 Pfam Cation efflux family 48 259 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00141 Adu-Chr6 1694471 1700423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00141 22 331 Inorganic Solute Cotransporters AT2G46800 66.577 1.37e-155 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g00141 Cation_efflux 3.7e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00141 K14689 - adu:107491895 598.971