Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00128 ATGGCTACAACTCATCTTGCTGCAACAACAGAGTCACTTGCTCTTGCTGTTGAGGCCAAAGACCCATCTGAGGCTATCTCTATTCTTTATCGTGTACTTGAGGATCCTTCTTCCTCACCCGAAGCTCTGCGTATGAAAGAGCAGGCGATCACAAACCTTACTGACCTTCTAAGGCAAGAGAATAGAGGAGAGGATCTACGCAGCCTTCTCACACAATTGAGGCCCTTTTTCTCTGTGATACCCAAGGCAAAAACTGCAAAGATAGTTAGGGGGATAATTGACGCAGTTGCTAAAATCCCAGGGACATCTGATCTTCAAATTGTGCTTTGCAGAGAAATGGTGCAGTGGACTTATGCTGAGAAGCGTACATTCCTGAGGCAGCGAGTTGAGGCAAGACTTGCAGCACTTCTGATGGAAAATAAGGAGTACTCAGAAGCTTTGACTCTTCTGTCAAGCTTGATCAAAGAGACACCAATTCCATTTAGATATGCAAGTAATGGAACTATCCATCCTTCTTTGATTCATTTTTGTGTAACCTCCCTCTCTTGGAAAAGCAGTTGTAACATGGCTGAGGAACTGGATAAGCCTCTGCTTGATCCTGAGAATTTCAACCGAGATGGTATTGATTTGGAGCGCATACCATTGGAAGAAGTATTTCAACAGTTGCGAACATCGCGAACCGGACTTTCATCTGACGACGCTGAAGCCCGGCTGCAGATATTTGGCCCCAACAAACTTGAAGAGAGGAAAGAGAATAAAATACTGAAATTTCTAAGTTTTATGTGGAATCCTCTATCATGGGTTATGGAAGCTGCAGCATTGATGGCCATTATCCTTGCTAATGGGGGAGGGGAAGGTCCTGATTGGCAAGACTTTGTAGGAATTTTATGCCTGCTGGTAATAAACTCAACAATAAGTTTCATAGAAGAAAATAATGCTGGTAATGCTGCAGCAGCACTAATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTAAGAGATGGGCTATGGCAAGAGCAAGATGCAGCTATATTAGTACCTGGAGACATAATCAGCATAAAGCTAGGAGATATCGTTCCAGCCGATGCTCGATTGCTCGAAGGGGACCCTCTAAAAATTGATCAGGCAAAATCAAGATGCTTTCTTATGCAGTCTGCGCTTACCGGAGAATCTCTACCTGTCACAAAGAGAACAGGTAATGAGGTATTTTCAGGTTCAACATGTAAGCAGGGAGAGATTGAAGCTGTAGTGATAGCAACAGGAGTTCATTCCTTTTTCGGAAAGGCAGCACATTTGGTAGATAGCACAGAAGTTGTTGGGCACTTTCAGAAGGTCCTTACTTCAATTGGTAACTTCTGCATTTGCTCTATAGCTATAGGGATGCTACTTGAAATAATCATAATGTTCCCAGTGGAGCATCGTTCATACAGGGATGGAATTAACAACCTTCTTGTTCTCTTGATCGGAGGAATACCCATTGCCATGCCTACAGTACTGTCTGTGACACTTGCAATCGGCTCTCATCGTCTTTCTCAACAGGTAAAACTCTCAACAATTTGTTATTGGAAGATATTTATGCTTGATACTCAATATGCTCTTTGTTCTTCTTTCAAGGGAGCCATCACAAAGAGAATGACTGCCATAGAAGAAATGGCTGGGATGGATGTCCTATGCAGTGATAAAACTGGAACTCTTACACTAAACCGGTTAACCGTTGATCGAAACCTTGTAGAGGTCTTTAACAGAAACATGGACAGAGATATGGTTATTCTATTAGCAGCCAGAGCATCCAGACTGGAAAACCAAGATGCCATTGACAGTGCCATTGTTAACATGCTAGCTGATCCAAAGGAGGCACGTGCAAACATTACTGAGCTTCATTTTCTACCTTTCAATCCAGTAGATAAACGCACAGCAATCACATATATTGATTCAGAGGGTAACTTTTACAGGGCCAGCAAAGGAGCACCCGAACAGATTCTAAATATGTGCCAAGAGAAAGACGAGATTGCTAGAAAAGTGCATGCAATCATTGACAAATTTGCTGAGAGGGGACTGCGATCTCTTGCAGTGGCGTATCAGGAAATCCCTGAAAAATCCAAGGATGGTCCTGGAGGTCCATGGACATTTTGTGGTTTGTTGCCTCTTTTTGATCCTCCAAGGCATGATAGTGCTGAGACCATCAGGAGAGCACTTAACCTGGGAGTCTGTGTTAAGATGATCACAGGGGATCAGTTGGCAATTGCAAAGGAGACTGGCAGAAGACTTGGTATGGGGACAAACATGTATCCTTCTTCATCTTTATTGGGACGTGAAAAAGATGAAAATGAAGCACTCCCAGTCGACGAGCTCATCGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACATAAATATGAAATAGTGAAGATTTTGCAAGAAAAGAAGCATGTAGTTGGAATGACAGGAGATGGAGTGAATGATGCCCCAGCACTGAAGAAAGCAGATATTGGAATAGCTGTGTCAGATGCTACAGATGCTGCAAGAGGTGCTGCTGATCTGGTCTTAACTGAGCCTGGCTTAAGTGTGATCATCAGCGCCGTCTTAACTAGCCGAGCTATATTTCAGAGAATGAAAAATTATACAATATATGCTGTTTCCATCACCATAAGGATAGTGCTTGGCTTTGTGCTCCTAGCTTTGATTTGGGAGTTTGATTTCCCACCTTTCATGGTCCTTATTATTGCAATACTGAATGATGGCACGATCATGACCATATCGAAAGACCGAGTGAAGCCATCCCCTACACCTGATAGTTGGAAGCTGCCAGAGATATTTGCCACAGGAATTGTCATTGGCACATACCTTGCTTTGGTTACTGTCCTATTCTACTGGGCAGTAGTTGACACCACTTTCTTTGAGACTCACTTCCATGTAGCATCCTTATCCAGTGACAGTGAGAAAGTTGCATCTGCTGTATATCTGCAAGTTAGCATCATCAGCCAAGCTTTAATTTTCGTGACTCGCAGCCGCGGCTGGTCATTCCTAGAGAGACCAGGAGTTCTACTAATGTGTGCCTTTGTAATAGCTCAATTGGTAGCCACCTTGATTGCTGTCTATGCACACATCAGTTTTGCTTATATAAGAGGAATTGGATGGCAGTGGGCTGGTGTTATATGGTTATATAGTTTAGTGTTTTATGTGCCTTTGGACATCATTAAGTTCATAGTGCGCTATGCTTTGAGTGGAGAAGCCTGGAATCTGGTATTTGACAAGAAGACTGCTTTTACATCAAAGAAAGACTATGGAAAGGAAGACAGGGCTGCAAAGTGGGTTCTTTCTCAGAGGAGTCTGCAAGGACTCATGGCTGTGGACCTCGGAGCCAACGAGAGGAGCTCTTCTTGGATAGCTGAACAAGCCAGGCGCCGCGCCGAAATAGCCAGGCTGGGGGAATTGCACACTTTGAGAGGACATGTAGAGTCTGTTGTGAGACTCAAAAAGTTAGATTTGAAAATGATCCAATCAGCACACACAGTCTAA 3519 0.4345 MATTHLAATTESLALAVEAKDPSEAISILYRVLEDPSSSPEALRMKEQAITNLTDLLRQENRGEDLRSLLTQLRPFFSVIPKAKTAKIVRGIIDAVAKIPGTSDLQIVLCREMVQWTYAEKRTFLRQRVEARLAALLMENKEYSEALTLLSSLIKETPIPFRYASNGTIHPSLIHFCVTSLSWKSSCNMAEELDKPLLDPENFNRDGIDLERIPLEEVFQQLRTSRTGLSSDDAEARLQIFGPNKLEERKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFVGILCLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGLWQEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQAKSRCFLMQSALTGESLPVTKRTGNEVFSGSTCKQGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAIGMLLEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQVKLSTICYWKIFMLDTQYALCSSFKGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLVEVFNRNMDRDMVILLAARASRLENQDAIDSAIVNMLADPKEARANITELHFLPFNPVDKRTAITYIDSEGNFYRASKGAPEQILNMCQEKDEIARKVHAIIDKFAERGLRSLAVAYQEIPEKSKDGPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGREKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDATDAARGAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWAVVDTTFFETHFHVASLSSDSEKVASAVYLQVSIISQALIFVTRSRGWSFLERPGVLLMCAFVIAQLVATLIAVYAHISFAYIRGIGWQWAGVIWLYSLVFYVPLDIIKFIVRYALSGEAWNLVFDKKTAFTSKKDYGKEDRAAKWVLSQRSLQGLMAVDLGANERSSSWIAEQARRRAEIARLGELHTLRGHVESVVRLKKLDLKMIQSAHTV 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00128 1172 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 189 513 - -
Adu06g00128 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 790 902 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00128 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 295 518 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00128 1172 CDD P-type_ATPase_H 228 1068 IPR006534 GO:0008553|GO:0016021|GO:0120029
Adu06g00128 1172 PANTHER CALCIUM-TRANSPORTING ATPASE 535 1152 - -
Adu06g00128 1172 SUPERFAMILY HAD-like 553 862 IPR036412 -
Adu06g00128 1172 SFLD C1.7: P-type atpase like 539 866 - -
Adu06g00128 1172 SMART Cation_ATPase_N_a_2 209 281 IPR004014 -
Adu06g00128 1172 Pfam Cation transporter/ATPase, N-terminus 213 275 IPR004014 -
Adu06g00128 1172 SUPERFAMILY Calcium ATPase, transmembrane domain M 208 1074 IPR023298 -
Adu06g00128 1172 Gene3D - 569 716 IPR023299 GO:0000166
Adu06g00128 1172 Gene3D - 31 158 - -
Adu06g00128 1172 Gene3D - 1124 1172 - -
Adu06g00128 1172 Pfam E1-E2 ATPase 324 511 - -
Adu06g00128 1172 ProSitePatterns E1-E2 ATPases phosphorylation site. 559 565 IPR018303 -
Adu06g00128 1172 PRINTS H+-transporting ATPase (proton pump) signature 987 1008 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00128 1172 PRINTS H+-transporting ATPase (proton pump) signature 673 691 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00128 1172 PRINTS H+-transporting ATPase (proton pump) signature 846 871 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00128 1172 PRINTS H+-transporting ATPase (proton pump) signature 787 803 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00128 1172 PRINTS H+-transporting ATPase (proton pump) signature 815 831 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00128 1172 Coils Coil 126 146 - -
Adu06g00128 1172 PANTHER CALCIUM-TRANSPORTING ATPASE 189 513 - -
Adu06g00128 1172 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 537 1033 IPR006534 GO:0008553|GO:0016021|GO:0120029
Adu06g00128 1172 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 535 1152 - -
Adu06g00128 1172 SFLD p-type atpase 539 866 IPR044492 -
Adu06g00128 1172 SUPERFAMILY Calcium ATPase, transduction domain A 326 432 IPR008250 -
Adu06g00128 1172 PRINTS P-type cation-transporting ATPase superfamily signature 557 571 - -
Adu06g00128 1172 PRINTS P-type cation-transporting ATPase superfamily signature 711 722 - -
Adu06g00128 1172 PRINTS P-type cation-transporting ATPase superfamily signature 382 396 - -
Adu06g00128 1172 PRINTS P-type cation-transporting ATPase superfamily signature 733 743 - -
Adu06g00128 1172 PRINTS P-type cation-transporting ATPase superfamily signature 815 834 - -
Adu06g00128 1172 PRINTS P-type cation-transporting ATPase superfamily signature 838 850 - -
Adu06g00128 1172 Gene3D - 816 1073 - -
Adu06g00128 1172 Gene3D - 396 561 - -
Adu06g00128 1172 Gene3D - 260 351 - -
Adu06g00128 1172 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 16 128 IPR040773 -
Adu06g00128 1172 Pfam haloacid dehalogenase-like hydrolase 553 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00128 Adu-Chr6 1541363 1548730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00128 189 1172 Primary Pumps ATPases AT1G17260 78.049 0.0 1535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00128 K01535 - zju:107434382 1656.34