Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00127 ATGGCGGTAGGAGAGGGTGGAAGAAGGGTGCTGCTACTGTTGTTGTTGTTTACCAGTAACTGCATTCTTCATTGGATGCCCGTTGCTGTTAATGGTAACACAGATCCGAATGATGCGGCCGCTATAAGGATTTTATTTCAATCTATGAACTCACCTTCACAGCTAGGTTGGCAAGCGAATGGTGATGATCCGTGTGGACAATATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAGAGATTAAGTTATCCAATCTTAAACTAACGGGAACATTGCCTTATGGATTACAACCCTTGACATCTTTGACCAACCTAGACCTGAGTAGCAACAATCTTGGAGGTGGCATACCATACCAGCTTCCTCCAAATATGCAGCGCTTAAATCTGGCTTATAATAACTTCACTGGGGCAATCCCTTACTCTATTTCTGATATGACCTCTCTTACAGACCTGAATCTCGCTCACAATCAGTTCCAGCAAGGATTGAACGTTAACTTCATGAAGCTTTCTACCCTCTCTTCATTGGATCTCTCCTTCAATTTATTGACAAGTGACCTTCCGCAGACTTTGAGCTCACTTTCAGGCATTACCAGCATGTATCTGCAGAACAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATTTGCCTCTTGAAAATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCAGAACAATTGAAAAGCATAAATTTAAAGACTGGTGGTAATACATGGAGCTCCGGACCTGCACCCCCACCTCCTCCCGGGACCCCACCATTACCTAAAAACAATCGACACCACAGAGCCGGTGGCGGAAGCACCACTACCTCCCCCTCAGATGCTGGCAGCAGTAACAACATGAGTGAAGGCAGCAAAAAATCTGGTGTTGGAGGTGGTGGCATAGCTGGAATTGTGATCTCGATAATTGTTGTTGGGGCAATAGTAGCATTCTTTTTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAACAGGACAATCAGTCCTTTGCTCCTCTTCCCTCAAATGAATTCCATGAATTGAAATCTGTGCCACCTTCCTCTATAACTGAAATGAAGACATTTGAAACTTCTGCCTCAATAAATCTTAAACCCCCACCTATGGATCGTCATAAATCATTTGACGAGGATGAACTTTCAAAGAAGCCTGCCATTATCAAGAAGACTGTCACATCTCCTGCTAATGTGAAATCATACTCTATAGCTGATCTACAGATTTCAACTGGAAGCTTCAGTATTGATCATCTTGTTGGTGAGGGGTCCTTTGGTCGTGTTTACCGGGCTCAGTTTGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAATGACCTTTCTGAAGAATTTACAGAAATAGTTTCAAACATCTCGCATTTACATCATCCGAACGTGACAGAACTAGTAGGTTATTGTTCAGAGTATGGGCAGCACCTCTTAGTCTATGAGTTTCATAGAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAGCCATTGATATGGAATTCCCGTGTGAAGATTGCATTGGGGACTGCACGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCGGTTGTACACAAGAACATTAAATCAGCCAACATATTACTTGATGCAGAACTTAATCCTCATCTTTCAGACAGTGGATTAGCAAGCTATATTCCAAATGCAGACCAGGTGTTGAACCAAAACGCCGGATCTGGATACGACGCACCTGAAGTTGCTTTGTGTGGTCAGTATACCATGAAAAGTGATGTTTATTGCTTTGGGGTCGTGATGTTGGAGCTACTCAGCGGACGTAAACCATTTGATAGCTCGAGACCTAGAGCTGAGCAGTCTCTAGTTCGTTGGGCCGCACCTCAACTCCATGATATTGATGCATTGACTAAAATGGTTGATCCTGCGCTGAAAGGGTTATATCCTGTTAAATCTTTGTCTCGTTTTGCAGATGTTATTGCTCTCTGCGTTCAGCTGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCCTTGGTACGGTTGGTGCAGCGAGCCAACATGAGCAGGCGGACTACTTTTGGATCTGATCATGGAGGATCCAATCGAGGGAGTGATGAACCCGCCATACATGATGTGTAA 2193 0.4323 MAVGEGGRRVLLLLLLFTSNCILHWMPVAVNGNTDPNDAAAIRILFQSMNSPSQLGWQANGDDPCGQYWKGITCSNNRVTEIKLSNLKLTGTLPYGLQPLTSLTNLDLSSNNLGGGIPYQLPPNMQRLNLAYNNFTGAIPYSISDMTSLTDLNLAHNQFQQGLNVNFMKLSTLSSLDLSFNLLTSDLPQTLSSLSGITSMYLQNNQFTGTIDVLANLPLENLNVENNNFTGWIPEQLKSINLKTGGNTWSSGPAPPPPPGTPPLPKNNRHHRAGGGSTTTSPSDAGSSNNMSEGSKKSGVGGGGIAGIVISIIVVGAIVAFFLVKRKSKKSSSDLEKQDNQSFAPLPSNEFHELKSVPPSSITEMKTFETSASINLKPPPMDRHKSFDEDELSKKPAIIKKTVTSPANVKSYSIADLQISTGSFSIDHLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSEEFTEIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHRNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQVLNQNAGSGYDAPEVALCGQYTMKSDVYCFGVVMLELLSGRKPFDSSRPRAEQSLVRWAAPQLHDIDALTKMVDPALKGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSDHGGSNRGSDEPAIHDV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00127 730 Gene3D Phosphorylase Kinase; domain 1 386 501 - -
Adu06g00127 730 SUPERFAMILY Protein kinase-like (PK-like) 405 696 IPR011009 -
Adu06g00127 730 Gene3D Ribonuclease Inhibitor 146 252 IPR032675 -
Adu06g00127 730 MobiDBLite consensus disorder prediction 272 296 - -
Adu06g00127 730 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Adu06g00127 730 Gene3D Ribonuclease Inhibitor 39 145 IPR032675 -
Adu06g00127 730 MobiDBLite consensus disorder prediction 708 730 - -
Adu06g00127 730 MobiDBLite consensus disorder prediction 243 300 - -
Adu06g00127 730 ProSiteProfiles Protein kinase domain profile. 424 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00127 730 Pfam Protein tyrosine and serine/threonine kinase 426 696 IPR001245 GO:0004672|GO:0006468
Adu06g00127 730 MobiDBLite consensus disorder prediction 251 265 - -
Adu06g00127 730 CDD STKc_IRAK 430 699 - -
Adu06g00127 730 MobiDBLite consensus disorder prediction 370 389 - -
Adu06g00127 730 Gene3D Transferase(Phosphotransferase) domain 1 503 715 - -
Adu06g00127 730 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 24 724 - -
Adu06g00127 730 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Adu06g00127 730 PANTHER OS01G0253100 PROTEIN 24 724 IPR045271 GO:0004714|GO:0006468
Adu06g00127 730 SUPERFAMILY L domain-like 35 238 - -
Adu06g00127 730 MobiDBLite consensus disorder prediction 330 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00127 Adu-Chr6 1530005 1535727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00127 8 709 Strubbelig Receptor Gene Family AT1G53730 65.585 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Adu06g00127 PK_Tyr_Ser-Thr 4.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00127 - - aip:107646143 1336.24