Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00106 ATGGGTGACTCGTCGGTGCCAAGTGACAAGTTGGGTGAGTCTCCGGCGGTTGAGTTAACGGGCAAGATCATGGTGGTGGCCGTAATAGTGTTGTTCATGGTGGTTGTGTTCGTGCTGTTCCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGGAGAGAGCAACATTCCCCAACCCAGAAGGCGGCGGCGGCGCTTTGTGTTTGCTCCTGGTCAAGACCCGGCCAGCTCCGGCGGTGTCCGAAGAGGCCTTGAGCCTTCTGTGCTGAGATCCCTGCCGGTGTTGGTTTTCCAGCCGCAAGATTTCAAGGAAGGAATGGAATGTGCGGTTTGCCTTTCGGAGGTTGAAGAGGGAGAAAAGGCGAGGCTGTTACCAAAGTGCAATCATGGCTTCCACGTGGATTGCATTGATATGTGGTTCCAATCCCATTCTACTTGCCCCCTCTGCAGAAACCCTGTGACCTCTGCCACCGAATCTTCTTCTGATGCAGCTTTCCCCACAAATGTCTTCGTTTGGGGGAACCAGGCCCAAGTGAGTTCTTCTTTGGAAGAAACTACTACTTCTTCGTCCTCGTCATCTTCAGCTAGCAGCAGTGACAGAGTTCATCATCATGGCGGTGGATCGTTGGTGATTGATATACCAAGCGAGATCACTTCATCTTCTGCAAGCAGGTTTGCAGAAGAAGATGAGATGAAATCTCCCATTACAGGGAGACTGAAATCATTGAAGAGGCTGTTAAGCAGGGACAGGAGGATGAATCCTTCTAGTCCACGTTCTATAGACCTTGAACATGCAACGGGATCAGGGCAGAGCTCTAGCTAG 825 0.5139 MGDSSVPSDKLGESPAVELTGKIMVVAVIVLFMVVVFVLFLHLYAKWFWWSIGESNIPQPRRRRRRFVFAPGQDPASSGGVRRGLEPSVLRSLPVLVFQPQDFKEGMECAVCLSEVEEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVTSATESSSDAAFPTNVFVWGNQAQVSSSLEETTTSSSSSSSASSSDRVHHHGGGSLVIDIPSEITSSSASRFAEEDEMKSPITGRLKSLKRLLSRDRRMNPSSPRSIDLEHATGSGQSSS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00106 274 MobiDBLite consensus disorder prediction 224 258 - -
Adu06g00106 274 PANTHER RING-H2 FINGER PROTEIN ATL3 5 259 - -
Adu06g00106 274 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 259 IPR044675 -
Adu06g00106 274 SMART ring_2 109 150 IPR001841 -
Adu06g00106 274 Pfam Ring finger domain 108 151 IPR001841 -
Adu06g00106 274 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Adu06g00106 274 MobiDBLite consensus disorder prediction 260 274 - -
Adu06g00106 274 MobiDBLite consensus disorder prediction 182 202 - -
Adu06g00106 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 161 IPR013083 -
Adu06g00106 274 CDD RING-H2_EL5_like 108 151 - -
Adu06g00106 274 SUPERFAMILY RING/U-box 89 158 - -
Adu06g00106 274 MobiDBLite consensus disorder prediction 182 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00106 Adu-Chr6 1334666 1335971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00106 18 254 C3H Transcription Factor Family AT1G53820 39.456 5.56e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00106 - - adu:107491762 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00106 06 1334666 1335971 Adu06g00106 06 1334666 1335971 ECH