Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00091 ATGAAGTCGGATTATGGAAGTAATATTGCCAAATTAAAGGAGATGGGAGAGCTTTCAGCTCCCCCTGGTTTTGCATCGCTTACATCTTTCATTTTGAAAAAGGGTAAAAAGGTTACAGAAAATGACAAACTTGCAACCTGTCTGAATGAAACTAAGCACGTGCCAGTTGATGCAGACGGTAAAAACGACGTGAATGATATTGGTACATATTACCAGATTTTTAAGAATCGACCCTGGATACTCTCTGACCAGAGCAAGAGCAACGACAAACCTGAGGAGTGTCACACTGAATTTATTCCTATGGATCACTCGTCAAATGCTAGTCGTCCAGAAGGGATCACTCGTGGATGTCCAAACTGCAATAATTGTTTGAAGGTAACAGCAAGGTGGCATCCTGAGGATGCAACGAGAGAAGCCCTTGAAGAAGCTCCTCTTTTCAACCCAACAGAAGAGGAATTCAATGACACCCTCAAATATATTGCAAGCATACGATCTAGCGCAGAGCCTTATGGAATTTGTCGTATTGTACCTCCTACTCGCTGGAAACCACCATGTTCTCTTGAGGAAAAGAACTTATGGGAAGGCTCTGAATTTGTTGCTCAAATTCAACGAATAGATGGAATCCAAGTTAAGCATGCAGAAGAAAATGTTGCTAGTTCTTGTGAAAATACAAAGGCCAAGAGAAGAAGGGTGACACCAGTAGATTTGGACTCTCATCTTGCGAATGCAAGCACTTGCACCGTAAATAGTCAGGGTGTTGAAGATTGTGTCTCTGAACCCTGTCCTAAATTCAGTCTCAAGACGTTTAAGAATTTTGCTGATGAATTCAAAATCCAGTACTTTGATTACAAGGGCAAGAATAAGAATGTGGGTTCTGATTTAAATTTAGATACAAATCAACATAAGTGGGAGCCATCTGTGGAGAATATTGAGGGTGAATATGGAAGGATTGTTCAAAATCCAACTGAAAAAATTGAGGTGCTTCATGGTAACACTTTGGAGGCTGAAGGTTTTAGCAGTGGATTTCCTACAGCTGCTGATTCTGGGGAGGAACACATTTCCCCTGAATATTTGAAATCTGGATGGAACTTAAACAACATAAATTCATTGCCTGGTTCTCTTCTTTCTTTTGAAAGCTCTGGTGCTTCACATAATTTTGGTCATCGAATTCATGTTGGAATGTGCTTCACTCTGCAAAAATGGGTAATGTCGCTGACTTACAGTATACTTGCATCTTCATCACGAAATTTACCACGAAGATATGCTGCCAACTATGAAACAATTAGGAAGAAGTATTTATCAGGTCTGCATGCAAGACAGCCTGATATTGATGATAATCTGATGATGCAGTTATCCTGCTTCATATTGAAGGCAGAGGGCATACCTGTATATCGCTGTGTTCAATATCCTCGTGAGTTTGTTCTTGTCTTCCCAGGAGCATATCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTAAACTTTGCTCCTCTCGAGTGGCTTCTTCATGGACTGAATGTGGTAGAGCTATATTGTGAGAAGAGGAAAAAGACATTAATTTCGTATGATAAACTTTTGCTGGGAGCAGCAAAGGAAGCTGTAAGGGCACGATGGGAAATCGATCTGTGTATGAACGACATGACAGATAAATTAACATGTAAAGATGCGTATCAAAGAAATGGGATCTTAGCAAAAGCTCTGGGTGCTCGTGTTAAGAGCGAAAGTATCAAGAGAGAATACCTATGCAGTTCTTTGAAATCACAAAGAATGGATGAAAGTTTTGACACTTGTGTCAAAAGGGAATGCGGCATATGTCTGTGTGATTTACACTTGTCTGCTGTACATTGTTTGTGTTCAGAAGACAAGTTTGCGTGCCTGGATCACGCGAAACAGCTTTGTCCATGCAGTTGGAGCAACAAAATCCTCCTCTACCGTTATGAAATTAGCGAGTTGAATGTTCTTTGTCAAGCTTTGGAAGGAAAGTTAAGTGCAGTCTATAAATGGGCGAAAGAGTATCTTGGATTAAGATTTCAGTCTGTTGCCTCCAATAGACAAATGAAACAAAACGGAGCGGCATCAGGAATCGTGGGGAACCCTCGCGGCAATTGTATTAGTTCTTTCAGCATTACCCCAAAAGAGAAGACGAAAGCAAAAGAGAAAACGTTGGGGGGCCGACCTCCTAGATCATGTGCTAATGGAGGAACCAATTCCACCAGTATCAAAACTGATATGAAGGCACCTGTGAGTAAGAGTAAGCCAACAACTTCAAAGAAGGTACAGCGCGATCAGAAAGTATCTACAGTTTCTTCGATCACCAACTCACGATACTTGTCTTTTCTACAGCAAAATACATTAGTCGAAGTGCCATCTGATAGTTGCTCTTCCTCTTCCTCAGAATCTGACAATGCGTAA 2418 0.4086 MKSDYGSNIAKLKEMGELSAPPGFASLTSFILKKGKKVTENDKLATCLNETKHVPVDADGKNDVNDIGTYYQIFKNRPWILSDQSKSNDKPEECHTEFIPMDHSSNASRPEGITRGCPNCNNCLKVTARWHPEDATREALEEAPLFNPTEEEFNDTLKYIASIRSSAEPYGICRIVPPTRWKPPCSLEEKNLWEGSEFVAQIQRIDGIQVKHAEENVASSCENTKAKRRRVTPVDLDSHLANASTCTVNSQGVEDCVSEPCPKFSLKTFKNFADEFKIQYFDYKGKNKNVGSDLNLDTNQHKWEPSVENIEGEYGRIVQNPTEKIEVLHGNTLEAEGFSSGFPTAADSGEEHISPEYLKSGWNLNNINSLPGSLLSFESSGASHNFGHRIHVGMCFTLQKWVMSLTYSILASSSRNLPRRYAANYETIRKKYLSGLHARQPDIDDNLMMQLSCFILKAEGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSESVNFAPLEWLLHGLNVVELYCEKRKKTLISYDKLLLGAAKEAVRARWEIDLCMNDMTDKLTCKDAYQRNGILAKALGARVKSESIKREYLCSSLKSQRMDESFDTCVKRECGICLCDLHLSAVHCLCSEDKFACLDHAKQLCPCSWSNKILLYRYEISELNVLCQALEGKLSAVYKWAKEYLGLRFQSVASNRQMKQNGAASGIVGNPRGNCISSFSITPKEKTKAKEKTLGGRPPRSCANGGTNSTSIKTDMKAPVSKSKPTTSKKVQRDQKVSTVSSITNSRYLSFLQQNTLVEVPSDSCSSSSSESDNA 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00091 805 MobiDBLite consensus disorder prediction 714 771 - -
Adu06g00091 805 Pfam jmjN domain 144 177 IPR003349 -
Adu06g00091 805 MobiDBLite consensus disorder prediction 732 771 - -
Adu06g00091 805 Pfam C5HC2 zinc finger 604 654 IPR004198 -
Adu06g00091 805 ProSiteProfiles JmjN domain profile. 143 184 IPR003349 -
Adu06g00091 805 SMART cupin_9 356 514 IPR003347 -
Adu06g00091 805 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 91 769 - -
Adu06g00091 805 ProSiteProfiles JmjC domain profile. 343 514 IPR003347 -
Adu06g00091 805 SUPERFAMILY Clavaminate synthase-like 418 541 - -
Adu06g00091 805 Gene3D Cupin 128 498 - -
Adu06g00091 805 SMART JmjN_1 142 183 IPR003349 -
Adu06g00091 805 Pfam JmjC domain, hydroxylase 418 497 IPR003347 -
Adu06g00091 805 PANTHER LYSINE-SPECIFIC DEMETHYLASE 91 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00091 Adu-Chr6 1189007 1193605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00091 19 723 JUMONJI Transcription Factor Family AT1G08620 41.870 1.50e-169 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu06g00091 JmjC 3.9e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00091 - - adu:107491746 1587.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00091 06 1189007 1193605 Adu06g00091 06 1189007 1193605 ECH