Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00077 ATGGGAAATGGAAATAGGCAGGGGAGGAGGAAGAAGAGGAGGAGTTTGAAAAACATGATGCAGTGCCTGTGCTCAGGGGAGCAGTTGAGACGAGAAGGAGGCATGGATGAGATGGCAGTTCCTTCGTCATCGGATTCTCTTGCCACTAAGGACTATTATTCGGCCACGACTGGCAGCGGCCGTTCTGGACAGGATGGACAACTTCAAAGGAGGCTGGATGCAGGAAATATCGAAGAAGCTGAATCGTCGTTGCGTGAGGCCGGCTGCTTGAATTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATATCAGAAAGGGAATATAGAAGCTGCTTTACATGTTTTTGAGGGAATAAATATAGACTCTGTGACTCCAGAGATAAAAATTTCTCTTGCCAAAATAAAAGAGAACCATAGGAGACATTCCAAGAATTATGTTCCGCCGCCAATGTCTGTACATACTGTTGGCACACTGTTTGAAGCAGTTTTCCTTAAAGCACAATGTTTGCAGGCTCTGGGAAGGTTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGACTCTTTGTTGCCTGAAGGCTCGTGTAAAAACTTTGGTGCTGAATGTAAATTGCAGGACACTGTAACTAAGGCAGTTGAGCTACTTCCAGAATTATGGAAACTTGCTGATTGTCCACATGAAGTTATCATGGCTTACCGACAGGCTCTCCTACGTCGGTGGAACCTTTCCTCCGAGACCATAGCAAAGATTCAGAAAGAATTTGCTGCTTTTCTTCTTTATAGCGGAGCGGAAGTAATCCCCCCAGATCTCCGTTCACAAAAGGAAAACTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTAATTTTAATTATTTTGCTAAGAAAAGTCTCTTTGAATGAAATTGAGTGGGATCCTTCAATTTTGGACCACCTTTCATTTGCTCTGTCGGTTTCAGGGGATTTGACAGCTTTAGCCAATCAATGGGAAGAATTGCTTCCTGGGACTATTAATCGAGGAGAAAGATATTATGCCCTTGCTCTTTGTTATTATGGTGCTGGTCAAGACCTGGTAGCATTGAATCTTCTTAAAAAATTATTAAGTAGCAACGAAGATCCAAAACATGTTCCAGCTTTGTTGATGGCTTCTAACATTTGTTGCAAGAACCCCAATCTTGCAGAAGATGGGGTCAACTATGCTCGCCGAATGCTAGAGAACTTGAATGGCAGATGTGACCAGTTGGAAAGTCGTGCAAATTGCTTACTTGGTATTTCACTTTCAGCACACTCAAAAATAGCTGTTTCTGATTCCGAGCGGATTCGGAGACAGTCCAAGGCACTTCAGTTTCTGGAAACTGCAAGGAGAATGACTAGAATGAGAGACCCGTTTATATTGTACTATCTTAGTTTAGAATATGCAGATCAAAGGGAGTTGGATTCTGCACTTCATTATGCTGAGTGCTTTCTGGAACTGGAAGCTAGGGCTAGTATTAAAGGGTGGTTGTTGTTAGCCCGGATATTATCAGCACAAAAACGGTTTTTGGATGCTGAATCTGTTGTTAATGCTGCTTTGGATCAGACTGCAAAATGGGATCAAGGAGAACTGTTGCGAACAAAAGCTAAACTGCAAATTGCACAGGGCCAGTTAAGGAGTGCCTTTGAGACATATGTTCAGCTTCTTTCTATTCTTCATATTCAACGGAAAACTTTTGGTCAATGGAAGAAGCTGTGTAAGGATTCTAGAGATCATGCTTGGAACTTGGAATTGGAATTATGGCATGATCTTGCTTATGTCTATATATCTCTGTCGTGTTGGCATGATGCAGAGATGTGTCTTTCTAGATCTAAAGCCATAAAACCATACACTGCATCAAGGTTGCATGCACTGGGTACAATGCACGAGGCAAAGGGTCTTTACAAGGAGGCTCTAAAAGCATTTCGAGATGCTTTGGATATCGATCCGGGACATGTCCCTAGCTTGATATCCTCTGCTGTGGTTCTTAGACAGTTCAATGGTCAGTCAAATGCTGCCATCAGAAGCTTTCTGATGGACGCACTACGGCATGACAGGATGAACGCTTCTGCATGGTACAATCTTGGCATTCTTCACAAGGCCGAAAATAAAATATCAGAAGCTGCAGAATGTTTTGAGGCAGCAAACTCCCTAGAAGAATCAGCACCAGTTGAACCATTCAGATGA 2214 0.4268 MGNGNRQGRRKKRRSLKNMMQCLCSGEQLRREGGMDEMAVPSSSDSLATKDYYSATTGSGRSGQDGQLQRRLDAGNIEEAESSLREAGCLNYEEARALLGRYEYQKGNIEAALHVFEGINIDSVTPEIKISLAKIKENHRRHSKNYVPPPMSVHTVGTLFEAVFLKAQCLQALGRFKEAAQSCKVILDIVDSLLPEGSCKNFGAECKLQDTVTKAVELLPELWKLADCPHEVIMAYRQALLRRWNLSSETIAKIQKEFAAFLLYSGAEVIPPDLRSQKENSFVPRNNIEEAILILIILLRKVSLNEIEWDPSILDHLSFALSVSGDLTALANQWEELLPGTINRGERYYALALCYYGAGQDLVALNLLKKLLSSNEDPKHVPALLMASNICCKNPNLAEDGVNYARRMLENLNGRCDQLESRANCLLGISLSAHSKIAVSDSERIRRQSKALQFLETARRMTRMRDPFILYYLSLEYADQRELDSALHYAECFLELEARASIKGWLLLARILSAQKRFLDAESVVNAALDQTAKWDQGELLRTKAKLQIAQGQLRSAFETYVQLLSILHIQRKTFGQWKKLCKDSRDHAWNLELELWHDLAYVYISLSCWHDAEMCLSRSKAIKPYTASRLHALGTMHEAKGLYKEALKAFRDALDIDPGHVPSLISSAVVLRQFNGQSNAAIRSFLMDALRHDRMNASAWYNLGILHKAENKISEAAECFEAANSLEESAPVEPFR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00077 737 PANTHER PROTEIN NPG1 12 737 IPR043376 -
Adu06g00077 737 MobiDBLite consensus disorder prediction 33 69 - -
Adu06g00077 737 Gene3D Tetratricopeptide repeat domain 442 574 IPR011990 GO:0005515
Adu06g00077 737 SUPERFAMILY TPR-like 345 567 IPR011990 GO:0005515
Adu06g00077 737 Coils Coil 402 422 - -
Adu06g00077 737 Gene3D Tetratricopeptide repeat domain 145 431 IPR011990 GO:0005515
Adu06g00077 737 Pfam Tetratricopeptide repeat 698 729 IPR019734 GO:0005515
Adu06g00077 737 Pfam Tetratricopeptide repeat 630 660 IPR019734 GO:0005515
Adu06g00077 737 Gene3D Tetratricopeptide repeat domain 575 733 IPR011990 GO:0005515
Adu06g00077 737 SUPERFAMILY TPR-like 159 377 IPR011990 GO:0005515
Adu06g00077 737 SMART tpr_5 628 661 IPR019734 GO:0005515
Adu06g00077 737 SMART tpr_5 698 731 IPR019734 GO:0005515
Adu06g00077 737 SMART tpr_5 594 627 IPR019734 GO:0005515
Adu06g00077 737 SMART tpr_5 345 378 IPR019734 GO:0005515
Adu06g00077 737 SMART tpr_5 160 193 IPR019734 GO:0005515
Adu06g00077 737 SMART tpr_5 502 535 IPR019734 GO:0005515
Adu06g00077 737 ProSiteProfiles TPR repeat profile. 628 661 IPR019734 GO:0005515
Adu06g00077 737 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 12 737 - -
Adu06g00077 737 ProSiteProfiles TPR repeat profile. 698 731 IPR019734 GO:0005515
Adu06g00077 737 SUPERFAMILY TPR-like 540 728 IPR011990 GO:0005515
Adu06g00077 737 MobiDBLite consensus disorder prediction 42 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00077 Adu-Chr6 963621 968527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00077 10 737 Calmodulin-binding Proteins AT4G28600 54.839 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00077 K21843 - gmx:100784353 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00077 06 963621 968527 Adu06g00077 06 963621 968527 ECH