Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00071 ATGAGATGGATGAAAAGTTTGAACTCTCCGATGTTGTCTTCATGGAACATCACAAATAACAACACAAGTCCATGCAACTGGAAAGGAATCAAGTGTAACAATGGTGGAAGTGTTGTTGATATAAAGCTTCCAAATTCAGGCCTTGATGGAACTCTCAACAGGTTTGATTTCTCTTCTTTTCCTAATCTCACTACACTCAATCTCACCATGAACAACCTTGTTGGAAAAATCCCATCTGAGATAGGAAATTTAACAAAATTGCAAGTTCTTGATCTTAGTAGCAACAATTTCACATATCAAATGCCACCAAAAATAGGTAACCTCTTAGAGCTACAAGTTCTAATCCTATCAAACAATTCATTGTTGCAACAAATTCCATATGAACTTAGCAATCTGCAGAATTTAAGAATTCTTGAACTAGGTGGTAACTTTTTAAGCAATCCTGACCCAAAATTCAAGGGCATGACATCCCTAACAGACCTTAACCTCACATATAATTCTCTCACAGAATTTCCACCATTTGTTCTTAAATGTCCAAATCTTGTGTCTCTTGCTCTTTCAATGAATACTATTGGGAAAGTTCCAGTTCAATTGTTCAACAGTCTCAAGAACCTAACAACCCTTGACCTTACACAAATCCAATTAGAGGGTCCAATTCCAACAGATATTAAGAATCTTTCAAAGCTTAAACACCTTGGTCTTGGAATCAACCAACTAAATGGTACAATTCCAAAGGAGATAGGTCTATTATCATCACTTGAGATTCTTGAACTGCATGAAAATTCCTTCCAAGGACCAATACCATCCACAATTGGAAATCTCACAATGCTTCAGAGACTTGATCTTCACAGCTCAGGGATAAATGCTAGCATCCCAGATGAAATAGGCTTCTGCACAAACCTTACTTTTATCGATATGTCCGGAAATAACCTCACAGGTTCCTTACCTCTTTCAATGGCTTCACTAACAAGAATCAAAGAGATGGGAATATCTGCTAACTATCTATCTGGAGAACTTCATCCATCTCTTCTTTCCAATTGGACAGAAATCAGCTCCTTGCAACTCCAAATGAATTATTTGTCAGGAAAACTTCATCCTGAGCTTGGTTTGCTTCAAAATCTTACTCTCTTGTTCCTCTACTCCAACCGGTTTTCTGGACCAATTCCACCAGAGATTGGAAACTTATCAAGCATAGAAGATCTTGAACTTTCTGACAACAATTTCAATGGTTCTATACCATCAACCATTGGAAAGTTGCAGAGCCTCACCCAGCTAACACTGGCCACAAACCAACTCAGTGGAATCCTTCCTCCTGAAATAGGTGATTTGGAAAGTCTTCAATCCCTTGACTTGAGTGGAAACAACCTTGCAGGGTCTTTGCCATCATCAATAGTTCGTTTGGAAAACCTCAACCTCCTTTATCTTCACAACAACAATTTCTCAGGAAGCATTCCACAAGATCTTGCACCTCCTTTCTTAACCAATTTGACCTTTTCCAACAATAGTTTCTCCGGGAAGCTACCTTCAGGAGTATGCAGGGGAGGGAACCTTGTCTACTTAGCTGCCAATCAGAACAATCTAGAAGGTCCAATCCCAGAAAGCCTGAGAAACTGCACTGGACTAGTCAGAGTTCGTCTTGAGAAGAACTCTCTTAGTGGAGATATCACGAATGCATTCGGCATATACCCGAATCTGAGCTTCATTGATTTAGGACAAAATCAGCTTACTGGTTCATTGACAAATAACTGGGGAGAGTGCAAAAATCTCTCAAGCTTTAGCATATCTTCCAATAAGATTCAAGGGAACATCCCTCCTGAGCTTGGAAGTTTGCCAAAGCTGCAAAATCTTGATCTCTCAAACAACAATCTAACAGGAAGCATCCCAGTGAAGCTCTTCAGTCCATCTTCCCAGCTGCTTAAACTAAACATGAGCAACAATAATCTCTCGGGTCAGTTACCGACCAGCATTGGAGCACTTTCACAGCTGCAATTTCTGGATTTATCAGCAAACAATATGAGAGGGTCAATTCCAAAAGAACTTGGAAACTGCAGAAAGCTTATATCACTGAAGCTGAGTATGAACCAGTTAGATGGCAATATGCCAATTGAGCTTGGGAATTTAGTGGAGTTGCAGCCTCTGTTGGATCTCAGCCATAACTCACTAAGTGGACAGATAATCACAGAGCTAGGAAATCTGATAGCCTTGGAAATTTTGAACCTTTCCCATAATCAGCTTTCTGGGACAGTTCCTTCTGCTTTGGAAGGACTAATAAGCCTTCAGTCAGTGGATATTTCTTATAACAAACTTGTAGGTCCCCTCCCGGACCTAGCTGCTTTTCAAAATGCTTCATCCGAAGCTCTAGCCGGCAATGCAGGTTTGTGTGCTGGTACTGCTAGCAATAGCAAAGCAAATTTGATTCCTTGTGTTGGAAGCAAAAGCAGCAAATCAAATAAACATAAGGTGGTCATTGCAGTAGTCATTCCACTTGCTGTTCTATTCATTTTATTAGTTTCCCTTGGAGTCTTCGCCTTGCTGCGCTACAAGAGAGTCGATCAAGAAGAAGAGGACAAGAGTGAAGAAGGAAAGGACTCACTCTTTGTATGGAATCACAGGAGCATAGTAGAGTTTAAGGACATTCGCAAGGCGACTGAGAATTTTGGTGACAAGTACTGCATAGGCATAGGAGGACAGGGAAGTGTCTACAAAGCAGTGCTTCCAACAGGTGATATCTTCGCAGTGAAGCGTCTCCACCAAATTGAGGATATAGACTTCTCCGGACACCAGACAAAGAATTTCATGTCTGAAGTTCATGCCTTAACCAATATTCGCCACAGAAACATTGTAACAATGTGTGGTTTTAGTTACTCGGACGGGTTTATATTTTTCATATATGAGCATGTGGAGAGAGGATCATTGCAGAAGTTGTTGCAGGACGACGAGGAGGCGAAGATGTTGACCTGGAATATCAGGCTGCAGATAATAAAAGGACTTGCAAATGCATTGTCTtacttgcaccatgattgcaagcccagcattgttcatagagacataacagggaacaatattctcttggacattgattatgagcctaaactatctgattttggGACAGCAAGGTTGCTGAAAGAAGAAGAATCAAATTGGACAGCTCCTGCCGGATCATACGGCTATATAGCACCAGAGCTTGCATTTACCATGAAAGTGACCGAAAAATGTGATGTATATAGTTTCGGAATTGTTGCACTAGAGATTTTGGCAGGGAAGTACCCTCATGAACTACTTTCGTGTCTAGAATCTGGGGGATTTGATCAACACCTTGTGGATTTTTTAGATAAGAGAATTGATCCTCCAACAAGAAATTCTGTTCAACTCCTGGTATTGGTGGCAAGGATGATTCTAAAATGTGTTGATAAAGATCCTATGGCAAGACCCACCATGCACCAAGTATGCCAAGAGTTTTCTTCATCTTCTGATTACTCATCCTCTAACCCGTTGAGAATGATCAAATTGAAAAATTTAATAGACATGTAA 3531 0.3931 MRWMKSLNSPMLSSWNITNNNTSPCNWKGIKCNNGGSVVDIKLPNSGLDGTLNRFDFSSFPNLTTLNLTMNNLVGKIPSEIGNLTKLQVLDLSSNNFTYQMPPKIGNLLELQVLILSNNSLLQQIPYELSNLQNLRILELGGNFLSNPDPKFKGMTSLTDLNLTYNSLTEFPPFVLKCPNLVSLALSMNTIGKVPVQLFNSLKNLTTLDLTQIQLEGPIPTDIKNLSKLKHLGLGINQLNGTIPKEIGLLSSLEILELHENSFQGPIPSTIGNLTMLQRLDLHSSGINASIPDEIGFCTNLTFIDMSGNNLTGSLPLSMASLTRIKEMGISANYLSGELHPSLLSNWTEISSLQLQMNYLSGKLHPELGLLQNLTLLFLYSNRFSGPIPPEIGNLSSIEDLELSDNNFNGSIPSTIGKLQSLTQLTLATNQLSGILPPEIGDLESLQSLDLSGNNLAGSLPSSIVRLENLNLLYLHNNNFSGSIPQDLAPPFLTNLTFSNNSFSGKLPSGVCRGGNLVYLAANQNNLEGPIPESLRNCTGLVRVRLEKNSLSGDITNAFGIYPNLSFIDLGQNQLTGSLTNNWGECKNLSSFSISSNKIQGNIPPELGSLPKLQNLDLSNNNLTGSIPVKLFSPSSQLLKLNMSNNNLSGQLPTSIGALSQLQFLDLSANNMRGSIPKELGNCRKLISLKLSMNQLDGNMPIELGNLVELQPLLDLSHNSLSGQIITELGNLIALEILNLSHNQLSGTVPSALEGLISLQSVDISYNKLVGPLPDLAAFQNASSEALAGNAGLCAGTASNSKANLIPCVGSKSSKSNKHKVVIAVVIPLAVLFILLVSLGVFALLRYKRVDQEEEDKSEEGKDSLFVWNHRSIVEFKDIRKATENFGDKYCIGIGGQGSVYKAVLPTGDIFAVKRLHQIEDIDFSGHQTKNFMSEVHALTNIRHRNIVTMCGFSYSDGFIFFIYEHVERGSLQKLLQDDEEAKMLTWNIRLQIIKGLANALSYLHHDCKPSIVHRDITGNNILLDIDYEPKLSDFGTARLLKEEESNWTAPAGSYGYIAPELAFTMKVTEKCDVYSFGIVALEILAGKYPHELLSCLESGGFDQHLVDFLDKRIDPPTRNSVQLLVLVARMILKCVDKDPMARPTMHQVCQEFSSSSDYSSSNPLRMIKLKNLIDM 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00071 1176 Gene3D Ribonuclease Inhibitor 344 418 IPR032675 -
Adu06g00071 1176 Gene3D Transferase(Phosphotransferase) domain 1 967 1168 - -
Adu06g00071 1176 SMART serkin_6 886 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00071 1176 Pfam Leucine Rich Repeat 735 756 IPR001611 GO:0005515
Adu06g00071 1176 SUPERFAMILY Protein kinase-like (PK-like) 866 1151 IPR011009 -
Adu06g00071 1176 SUPERFAMILY L domain-like 489 797 - -
Adu06g00071 1176 Coils Coil 1171 1176 - -
Adu06g00071 1176 Pfam Leucine rich repeat N-terminal domain 3 33 IPR013210 -
Adu06g00071 1176 SUPERFAMILY L domain-like 10 316 - -
Adu06g00071 1176 ProSiteProfiles Leucine-rich repeat profile. 612 634 IPR001611 GO:0005515
Adu06g00071 1176 Pfam Leucine rich repeat 398 456 IPR001611 GO:0005515
Adu06g00071 1176 Pfam Leucine rich repeat 611 671 IPR001611 GO:0005515
Adu06g00071 1176 Pfam Leucine rich repeat 179 239 IPR001611 GO:0005515
Adu06g00071 1176 Gene3D Ribonuclease Inhibitor 150 241 IPR032675 -
Adu06g00071 1176 Gene3D Phosphorylase Kinase; domain 1 847 966 - -
Adu06g00071 1176 SUPERFAMILY RNI-like 243 576 - -
Adu06g00071 1176 SMART LRR_sd22_2 84 110 - -
Adu06g00071 1176 SMART LRR_sd22_2 586 618 - -
Adu06g00071 1176 SMART LRR_sd22_2 132 163 - -
Adu06g00071 1176 SMART LRR_sd22_2 659 680 - -
Adu06g00071 1176 SMART LRR_sd22_2 443 472 - -
Adu06g00071 1176 SMART LRR_sd22_2 202 228 - -
Adu06g00071 1176 SMART LRR_sd22_2 371 403 - -
Adu06g00071 1176 SMART LRR_sd22_2 298 319 - -
Adu06g00071 1176 Gene3D Ribonuclease Inhibitor 242 343 IPR032675 -
Adu06g00071 1176 Gene3D Ribonuclease Inhibitor 2 149 IPR032675 -
Adu06g00071 1176 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 1174 - -
Adu06g00071 1176 PRINTS Leucine-rich repeat signature 613 626 - -
Adu06g00071 1176 PRINTS Leucine-rich repeat signature 732 745 - -
Adu06g00071 1176 SMART LRR_typ_2 274 298 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 179 201 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 443 467 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 84 107 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 132 154 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 732 755 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 419 442 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 659 683 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 610 634 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 108 131 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 155 178 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 371 395 IPR003591 -
Adu06g00071 1176 SMART LRR_typ_2 226 250 IPR003591 -
Adu06g00071 1176 PANTHER - 2 1174 - -
Adu06g00071 1176 Pfam Protein kinase domain 891 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00071 1176 ProSiteProfiles Protein kinase domain profile. 886 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00071 1176 Gene3D Ribonuclease Inhibitor 491 804 IPR032675 -
Adu06g00071 1176 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1012 1024 IPR008266 GO:0004672|GO:0006468
Adu06g00071 1176 Gene3D Ribonuclease Inhibitor 419 490 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00071 Adu-Chr6 901347 905827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00071 1 628 Receptor kinase-like Gene Family AT4G08850 31.969 6.44e-86 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu06g00071 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00071 - - ccaj:109803789 1585.85