Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00066 ATGAAAGCACACCCTGCAAAGCAACTCAATAACATGGGGATGTCAGGAGCACTTCCTTCCTCGTTGGCCGGCCTTCCACCGTCTCTAGAAGATACATACTCCAAATTATCTGATTCACAGCCTACTTTTGTGGAAAATGAGCTTACAACAAGACCTTTTACTCATTCAAGTTCTAGTGGAGTAGTTGGGCCTATGTTTTCTTCTTCTCCGGGATATTCAACCGATCTTCATCATTCATCCCTTTCACCTCATGATAAACAATCTAAAAATACTCATTTTTTGTCACCGACATTCGGTAACATTGCTTCGTTGCCATTACCTTATTCTTCAAATAATGGACCAATACCTTCGACCACACCAACCCATTATTCCAAAGGAAACAGTGCTTCCTGGCATGGAGATTCCCTGAATAGCTTTCTTGATTTGCCCACTAGTAACCCCATTGACCGCAGTCAAGTAGAAAGCAGTGCCTGCAATATTATGGCATCTGAGGATTATTCTAAGCAAAATAATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGACACTTTGACTTCAAATTGGAATGATATTCTTGTTGACAACATTCAAGATCTTGAACCAAAGGTGGTGTTCCAGGTTCCAAAATCATCTTCACAATTTCCAGCAGGCCATCAACAACTACCTGCTTCATCTGGAGAAAATCATGTGGGTGCCACGCCATCTTCCTCAGCAAATTCTGCACCTGCCAAGCCCCGGATGCGTTGGACACCCGAGCTTCATGAGGCCTTTGTGGATGCTGTCAATCAACTAGGTGGGAGTGAAAGAGCTACTCCTAAGGGCGTGCTGAAACTCATGAAAGTTGAAGGACTAACTATATACCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGATCTTCTGAGAAAAAACTAGGTACCATTGAAGAGATGCCATCTTTAGATTTGAAGACTGGTATTGAAATCACTGAAGCTCTGCGAATGCAGATGGAGGTTCAGAAGCGCTTGCACGAGCAGCTTGAGATTCAAAGAAATCTACAGTTACGTATAGAAGAACAAGGAAGGTATCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGGCATTGAACCATTCAAGGCATCATCATCTGCCATTGATAGTACATCTGGAGTGTCCTCTGATGCCATGAAAGATTCACCTGCCAAAAGTGAAATGGAAGCCACCCCAGTGGACCTTTGCAGTTCAGAGCCTCATCAAGCTAATGGCAATGCCACAGCTGAGAAAAAATCACTGGAAGTGAGTGGGAAGCAAGATGCTCCCGAAGATCCTAAGCAACTTGCTTCTGAAAGTGAAGATAGTGGTCATCCCCCAAAGCGTCCGAGGACAGATGAGTGA 1413 0.4381 MKAHPAKQLNNMGMSGALPSSLAGLPPSLEDTYSKLSDSQPTFVENELTTRPFTHSSSSGVVGPMFSSSPGYSTDLHHSSLSPHDKQSKNTHFLSPTFGNIASLPLPYSSNNGPIPSTTPTHYSKGNSASWHGDSLNSFLDLPTSNPIDRSQVESSACNIMASEDYSKQNNWQEWADQLISDDDTLTSNWNDILVDNIQDLEPKVVFQVPKSSSQFPAGHQQLPASSGENHVGATPSSSANSAPAKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGSSEKKLGTIEEMPSLDLKTGIEITEALRMQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGGIEPFKASSSAIDSTSGVSSDAMKDSPAKSEMEATPVDLCSSEPHQANGNATAEKKSLEVSGKQDAPEDPKQLASESEDSGHPPKRPRTDE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00066 470 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 243 303 IPR017930 -
Adu06g00066 470 Pfam Myb-like DNA-binding domain 248 299 IPR001005 -
Adu06g00066 470 MobiDBLite consensus disorder prediction 381 470 - -
Adu06g00066 470 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 43 470 IPR044848 GO:0003700
Adu06g00066 470 MobiDBLite consensus disorder prediction 387 402 - -
Adu06g00066 470 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 43 470 - -
Adu06g00066 470 MobiDBLite consensus disorder prediction 32 78 - -
Adu06g00066 470 MobiDBLite consensus disorder prediction 437 470 - -
Adu06g00066 470 MobiDBLite consensus disorder prediction 420 436 - -
Adu06g00066 470 MobiDBLite consensus disorder prediction 300 319 - -
Adu06g00066 470 MobiDBLite consensus disorder prediction 212 248 - -
Adu06g00066 470 SUPERFAMILY Homeodomain-like 244 300 IPR009057 -
Adu06g00066 470 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 246 300 IPR006447 GO:0003677
Adu06g00066 470 MobiDBLite consensus disorder prediction 1 91 - -
Adu06g00066 470 Gene3D - 245 304 - -
Adu06g00066 470 MobiDBLite consensus disorder prediction 212 245 - -
Adu06g00066 470 Pfam MYB-CC type transfactor, LHEQLE motif 331 378 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00066 Adu-Chr6 842214 847470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00066 1 412 G2-like Transcription Factor Family AT4G28610 46.429 1.81e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu06g00066 Myb_DNA-binding 1.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00066 - - gmx:100810560 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00066 06 842214 847470 Adu06g00066 06 842214 847470 ECH
Adu06g00066 06 842214 847470 Adu02g01034 02 17468407 17471771 ECH
Adu06g00066 06 842214 847470 Adu02g01034 02 17468407 17471771 PCT