Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00064 ATGGCGCCAAATCCAAAGGTGGTAGCAGCCTATCGTGCAATGGCAAATCTTGGGATTCATGAATCAAAAGTGAAGCCAGTACTAAAGAAGCTCCTTAAGTTGTATGATAAAAACTGGGAGCTTATTGAAGAAGAGAACTATAGAGCTCTGGCAGATGCAATATTTGAGGAGGAGGAAAATCCGGTGCCGGAGCAAGAGCAGGAAAAGAAAAACAAGAGAGTTGATGAAGCAGAGTTAGATGATGAAGTGCAAGATCAGCCACTGCGACCTAAAAAGAGGTTGCGCTTGAGAGGTCCAGAGTTTCAGTCTTCAAATAATCAGATTAGCTGTGGTCCCAGTTCAGCTGCTTTTCCATCGAAAACTCCTAAATTAGAAGATGACACAGTACCTGGAAATGGTTCTATACTGCATGCTCAAAGTGCTGCAGCATTATCTGATGGAAATGGAATGATTGAAGCTCATCAAGTTCATTCACAAGATGACATTATTGACAAGGGAAAGAAACCTGTATCACCTCAAGTTACTCCCAGAGGAAGAAGATCTACATCGGATGGAGTGCCACCAGCAGTACTACCTAAAGAACCAGCAGTTGAACCGCTGAGCACTTTGTCTCCAAGAAGCAAAATGGCCCATCCTCTTGTATGGATCAAGCCCAAGGACGAGCCAATTGATGACGCACGAGATAATGAGGCTCCCATTTCAATGATTCTTCCTGAACCATCTAGTGGAAAGGATTCTTCAATGATGAATGGTGCAGCTGGACAGCAAGATTGTGACGACACTGTGGCATCACATTGCTTAAATGATGAAGTTGCTGGTGAAGATAACCTTCGCTCTTCAAATGAAGATGCCCCTTCTACTGTAGAGATAGGCTCATCACCTGTACAAGAGGAAGGATCTGCAAAGATAACACCAAACATCAGCATGCCAAAGGAATCTGAGTCACATGATGCTCTGGTTGCCGGAGGAAATGAAGATCCAGTTACACCTTGCATTTCAAATGGATCTGCCAATGTTAATTCTCATTCTTCCTTGCCCAATACTGAAATTCCAGTATCTCTGCCCTGCTCGTGTGGTCTGGATGACACTTCACCAGTTCCCCAGGAGGTTGGAAATAATGATTGCTTAGCAAGTGATGATGGAAGGGAGCTAGTGGATCCTATATCTAATAATTCTCATAGCTTAGTTACTGTTCCAAAGAATCAGCTTACTACTAATGCTATAATGACTGTTCACGATGTTAATGACATATCAAAGGGTGAAGAAAAAGTGAAAATTTCATGGGTCAATAACATTACTGATGATTTCCCACCATCCTTTCATTACATACCCCGAAACCTTGTATTCCAAAATGCTTATGTTAGTATTTCTCTGTCTCGTATTGGGAATGAAGATTGCTGTTCTACTTGCATAGGCAATTGTGTCTTGTCTTCTGAATCATGTTCTTGTGCGAATAAAACTGGTGGTGGATTTGCCTACACTGCACAAGGCCTACTGAAGGAAGAGTTTTTGGATGAGTGCATTGTCATCAGCTGCAACCCTAAAAATTGTTTCTATTGTGAAGACTGCCCAGTTGAAAGATCAAAGAATGATGATTGTTCAGAACCATGTAAAGGACACTTAAGGAGGAAGTTTATTAAGGAATGCTGGAGTAAATGTGGCTGTGGTAAAAAATGTGGCAATCGGGTTGTCCAGCGAGGAATAACTTGCAACTTGCAGGTGTTTTTAACTTCTGAAGGAAAAGGTTGGGGTCTTCGGACGTTAGAGGACCTTCCCAAAGGGGCATTTGTGTGTGAGTTTGTTGGAGAAATTCTAACCGTCAAAGAATTGCATGAGAGGAGCCTAAAATATCCCAAAAATAGGAAATATACATACCCAATTCTATTGGATGCAGATTGGGAATCAGGAGGTGTGGGGGATAAAGAAGCACTTTGCTTGTATGCAGCATCTTATGGAAATGCTGCTAGGTTTATTAATCACAGATGTTTAGATGCTAACTTGATTGAGATCCCCGTTGAAATTGAGGGCCCAGATCATCACTACTATCATGTGAGAAGTTAG 2061 0.4192 MAPNPKVVAAYRAMANLGIHESKVKPVLKKLLKLYDKNWELIEEENYRALADAIFEEEENPVPEQEQEKKNKRVDEAELDDEVQDQPLRPKKRLRLRGPEFQSSNNQISCGPSSAAFPSKTPKLEDDTVPGNGSILHAQSAAALSDGNGMIEAHQVHSQDDIIDKGKKPVSPQVTPRGRRSTSDGVPPAVLPKEPAVEPLSTLSPRSKMAHPLVWIKPKDEPIDDARDNEAPISMILPEPSSGKDSSMMNGAAGQQDCDDTVASHCLNDEVAGEDNLRSSNEDAPSTVEIGSSPVQEEGSAKITPNISMPKESESHDALVAGGNEDPVTPCISNGSANVNSHSSLPNTEIPVSLPCSCGLDDTSPVPQEVGNNDCLASDDGRELVDPISNNSHSLVTVPKNQLTTNAIMTVHDVNDISKGEEKVKISWVNNITDDFPPSFHYIPRNLVFQNAYVSISLSRIGNEDCCSTCIGNCVLSSESCSCANKTGGGFAYTAQGLLKEEFLDECIVISCNPKNCFYCEDCPVERSKNDDCSEPCKGHLRRKFIKECWSKCGCGKKCGNRVVQRGITCNLQVFLTSEGKGWGLRTLEDLPKGAFVCEFVGEILTVKELHERSLKYPKNRKYTYPILLDADWESGGVGDKEALCLYAASYGNAARFINHRCLDANLIEIPVEIEGPDHHYYHVRS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00064 686 Gene3D SET domain 528 685 IPR046341 -
Adu06g00064 686 MobiDBLite consensus disorder prediction 57 128 - -
Adu06g00064 686 ProSiteProfiles SET domain profile. 570 686 IPR001214 GO:0005515
Adu06g00064 686 MobiDBLite consensus disorder prediction 63 98 - -
Adu06g00064 686 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 GO:0018024
Adu06g00064 686 SUPERFAMILY SET domain 424 684 IPR046341 -
Adu06g00064 686 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 684 - -
Adu06g00064 686 MobiDBLite consensus disorder prediction 274 309 - -
Adu06g00064 686 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 684 - -
Adu06g00064 686 SMART preset_2 414 554 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g00064 686 MobiDBLite consensus disorder prediction 158 196 - -
Adu06g00064 686 CDD SET_SETDB-like 438 684 - -
Adu06g00064 686 Pfam Pre-SET motif 417 562 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g00064 686 Gene3D SET domain 397 527 IPR046341 -
Adu06g00064 686 Pfam SET domain 582 667 IPR001214 GO:0005515
Adu06g00064 686 MobiDBLite consensus disorder prediction 279 309 - -
Adu06g00064 686 MobiDBLite consensus disorder prediction 99 116 - -
Adu06g00064 686 Gene3D - 1 60 IPR043017 -
Adu06g00064 686 ProSiteProfiles Pre-SET domain profile. 466 567 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g00064 686 SMART set_7 570 684 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00064 Adu-Chr6 828213 834577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00064 483 684 C2H2 Transcription Factor Family AT2G23740 33.028 2.94e-21 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu06g00064 Pre-SET 2.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00064 - - gmx:100788602 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00064 06 828213 834577 Adu06g00064 06 828213 834577 ECH
Adu02g01054 02 18702740 18712241 Adu06g00064 06 828213 834577 PCT