Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00053 ATGTCTACAACACTACCTCCTTCTTCTTCTTCTGTTGGATCGTCTAATACCCTTTTGAATGAGATCCTTTCTTTGCCAGTTTTGGAACTTGTAGCAACGTGTGCCAACTTGGCACTGCTGCTTGTGTTTCTCATTGTTATCTTTTCAAGAAAGGTGCTTGGGAACGTGGGAAGTGTTAGATATGACAATAAGGATGATATTGCAAGCAATGGTGGCGCAGTTAGTCCTAGAGTTGTTGATGCACAAACACATCAAGTTAGGATTGGTACATGGTTCAAGCTTTCGGTCTTGTCTTGTCTCTATGTTCTGTTGGTGCAACTTGTGGTGTTGGGGTTTGATGCTGTAGCTTTGATTCAGGGAAAGGGTAATTTGTCTGTAATTTTGTTGCCAGTTTCTCAGGGTTTGTCTTGGATTGTGTTGAGCTTCTTGGCTTTAAATTGCAAGGCTCAGAGGCTTGATAGGTTTCCATTTTTGTTGAGAGTTTGGTGGAGTGTGTCATTTGTTATTTGCTTGTGCACTTTGTATGTTGATGGGAGGGGGTTATGGGATGAAGGTTACAAGCATTTGCAGTCCCATGTGGTGGTGAATTTCGCAGCCACGCCTGCACTTGCCTTCTTGTGTATTGTTGCAGCTAGGGGTGCTACCGGTATTGAAGTCTGTGGGGATTCGGATTTTCGAGAGCCGTTGCTTGCTGAAGAAGAATCAGGGTGTGTGAAGGTTACTCCATACAGTGATGCTGGAATTTTTAGCCTGGCTACTCTGTCTTGGCTGAACCCAATTCTTTCCCTCGGCGCAAGGCGACCATTGGAGCTTAAGGACATTCCCCTAGTGGCACGAAAAGATCGAGCTAAGACAAATTACAAGATTTTGAATTCTAATTGGGAGAGATTGAAGGCTGAAAATTCGTCCGGACAGCCTTCGTTAGCTTGGGCACTTCTCAGATCATTTTGGAAGGAAGCAGCTTGGAATGCCATCTTTGCTGGTTTGAATACTCTTGTTTCTTATGTTGGTCCTTACATGGTAAGCTACTTTGTTGATTACTTGAGTGGCAAACAAAGTTATCCGAACGAGGGCTATGTCCTCGCTGGGATATTCTTCGTGGCGAAGCTTGTTGAGACCTTTACAACTCGTCAATGGTATCTAGGAGTGGATATCTTGGGCATGCATGTTAGATCAGCTCTAACAGCGATGGTGTATCGAAAGGGGCTTAGACTCTCGAGCTTAGCGAAGCAAAGTCACACAAGTGGAGAGATTGTTAACTACATGGCTGTAGATGTTCAAAGAGTAGGGGACTACTCTTGGTACCTTCATGATATGTGGATGCTTCCTATGCAGATTGTTCTTGCCCTTCTAATCTTGTACAAGAACGTTGGAATTGCTTGTATTGCAACACTGATTGCTACCATCATTTCAATTGTTGTCACTGTTCCAGTAGCTAGGATCCAAGAAGATTATCAAGACAAGTTAATGGCTGCAAAAGATGAAAGGATGAGAAAAACATCTGAGTGCTTAAGGAACATGAGGATTCTCAAGTTGCAAGCTTGGGAAGACAGGTATCAAATAAAGTTAGAGGAGATGCGTGGAGTCGAGTTCAAATGGCTTCGAAAAGCGTTGTACTCGCAGGCTTTCATAACATTCATATTCTGGAGCTCCCCCATTTTTGTTTCAGCTGTCACTTTCGCTACATGCATATTGCTGGGTGGAGAGTTGACTGCAGGTGGTGTGCTTTCTGCTTTGGCTACTTTTAGAATCCTCCAAGAACCTCTCAGGAATTTTCCGGACTTGGTTTCAACAATGGCTCAGACTAAGGTTTCGATTGATCGAATATCTTGTTTCCTGCTTGAGGAAGAGTTGCAGGAAGATGCAACTATTGTCTTACCTCATGGAATCTCTAATGTTGCAGTAGAAATTAAGGATGGCATCTTCTGTTGGGACCCTTCTTCATCTTCTAGACCAACTCTATCAGGGATTCATATGAAGGCCGAAAAAGGAATGCGTGTGGCTGTTTGTGGTATGGTTGGTTCTGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCCGGCGAAGTAAGGGTGTGCGGCTTGTCTGCATATGTCTCGCAATCAGCATGGATACAGTCTGGAAACATAGAGGAAAATATTCTGTTTGGAAGCCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCTCTTAAGAAGGACTTGGAGCTTTTCTCACATGGTGATCAAACAATTATTGGTGATAGAGGCATAAACCTGAGTGGTGGCCAGAAGCAGCGTGTTCAGCTCGCACGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTTAGTGCAGTTGATGCTCACACCGGATCAGAATTGTTTAGGGAGTATATATTGACAGCACTAGCAAATAAAACAGTAATCTATGTGACACATCAAGTTGAATTTCTTCCTGCTGCTGATTTGATACTGGTTCTCAAAGAAGGCTGCATCATACAAGCTGGAAAATATGATGATCTCTTACAAGCAGGAACAGATTTTAATGCTCTAGTTTCTGCTCACCATGAAGCCATAGAGGCTATGGAAATTCCTAGTTTCTCATCTGAAGATTCCGAAGAACATTTATCCTTAAATGCATTGGTTATATCCAGTAAGAAGTCTATTTGTTCCACAAATGATATTGACAATTTGGCAAAGGAACTGCAAGAGGGATCATCGAATTCAGATCAAAAAGCGATTAAGGAGAAGAAGAAAACAAAACGCTCAAGGAAAAAGCAACTAGTTCAAGAAGAGGAGAGGGTCAGAGGTAGAATCAGCATGAAGGTTTATTTGTCATACATGGCAGCAGCATATAAAGGGTTATTGATTCCTCTCATAATCATGGCGCAAACGTTCTTTCAGTTTCTACAGATTGCTAGTAATTGGTGGATGGCTTGGGCTAACCCACAAACTGAAGGAGACCTGCCAAAAGTATCTCCCACAGAGCTTCTTGTTGTTTACATGGCCCTCGCTTTCGGCAGCTCCTGCTTTATATTTGTAAGGGCTATTCTGGTGGCTACATTTGGCCTTGCAGCAGCTCAGAAGCTGTTCTTGAAGATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTCGACTCTACACCTGCCGGACGGATCTTGAATCGTGTATCAGTTGATCAAAGTGTTGTGGATCTTGACATTCCTTTCAGACTCGGTGGCTTCGCTTCGACAACAATACAACTTATTGGTATTGTTGGTGTGATGACAGAAGTCACATGGCAAGTTTTGCTCCTAGTTATCCCAATGGGTGTTGCTTGTTTGTGGATGCAGAAATACTATATGGCTTCCTCGAGGGAACTAGTCCGAATTGTAAGCATCCAGAAGTCTCCAATCATAAATCTTTTTGCTGAATCAATTGCTGGAGCTTCTACAATAAGAGGATTTGGACAAGAAAAGAGGTTTATGAAGCGAAATCTCTATCTTCTAGATTGCTTTGCTCGGCCATTCTTCTGCAGTCTTGCTGCTATCGAATGGCTCTGCTTGCGGATGGAGTTACTGTCAACTTTTGTATTTGCTTTCTGCATGGTATTACTTGTAAGCTTCCCCCATGGAAGCATTGATCCCAGCATGGCTGGACTTGCTGTGACTTATGGACTCAATTTGAATGCACGTTTATCGAGATGGATACTTAGCTTCTGCAAACTCGAAAATAAAATCATTTCTATTGAAAGAATTTACCAATACAGTCAAATTCCAAGTGAAGCACCAGCAATCATTGAAGATTTTCGCCCTCCACCCTCATGGCCTGAAAATGGAACAATTGAAATAATTGATCTGAAGGCCAAAATCAATGGTGGTGGTGGTGGTAGAGGACTTCGACCGATTCCTAGCAGATAA 3918 0.426 MSTTLPPSSSSVGSSNTLLNEILSLPVLELVATCANLALLLVFLIVIFSRKVLGNVGSVRYDNKDDIASNGGAVSPRVVDAQTHQVRIGTWFKLSVLSCLYVLLVQLVVLGFDAVALIQGKGNLSVILLPVSQGLSWIVLSFLALNCKAQRLDRFPFLLRVWWSVSFVICLCTLYVDGRGLWDEGYKHLQSHVVVNFAATPALAFLCIVAARGATGIEVCGDSDFREPLLAEEESGCVKVTPYSDAGIFSLATLSWLNPILSLGARRPLELKDIPLVARKDRAKTNYKILNSNWERLKAENSSGQPSLAWALLRSFWKEAAWNAIFAGLNTLVSYVGPYMVSYFVDYLSGKQSYPNEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKNVGIACIATLIATIISIVVTVPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYQIKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFATCILLGGELTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSIDRISCFLLEEELQEDATIVLPHGISNVAVEIKDGIFCWDPSSSSRPTLSGIHMKAEKGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGLSAYVSQSAWIQSGNIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALANKTVIYVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFNALVSAHHEAIEAMEIPSFSSEDSEEHLSLNALVISSKKSICSTNDIDNLAKELQEGSSNSDQKAIKEKKKTKRSRKKQLVQEEERVRGRISMKVYLSYMAAAYKGLLIPLIIMAQTFFQFLQIASNWWMAWANPQTEGDLPKVSPTELLVVYMALAFGSSCFIFVRAILVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVIPMGVACLWMQKYYMASSRELVRIVSIQKSPIINLFAESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDFRPPPSWPENGTIEIIDLKAKINGGGGGRGLRPIPSR 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00053 1305 Gene3D ABC transporter type 1, transmembrane domain 923 1262 IPR036640 GO:0005524|GO:0016021
Adu06g00053 1305 Gene3D ABC transporter type 1, transmembrane domain 294 616 IPR036640 GO:0005524|GO:0016021
Adu06g00053 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 324 601 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00053 1305 CDD ABCC_MRP_domain1 635 835 - -
Adu06g00053 1305 Pfam ABC transporter 654 788 IPR003439 GO:0005524
Adu06g00053 1305 CDD ABC_6TM_ABCC_D2 962 1256 IPR044726 GO:0140359
Adu06g00053 1305 Pfam ABC transporter transmembrane region 325 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00053 1305 Pfam ABC transporter transmembrane region 971 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00053 1305 MobiDBLite consensus disorder prediction 908 932 - -
Adu06g00053 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 964 1234 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00053 1305 Coils Coil 919 939 - -
Adu06g00053 1305 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Adu06g00053 1305 Coils Coil 280 300 - -
Adu06g00053 1305 SUPERFAMILY ABC transporter transmembrane region 309 615 IPR036640 GO:0005524|GO:0016021
Adu06g00053 1305 CDD ABC_6TM_ABCC_D1 322 609 IPR044746 GO:0140359
Adu06g00053 1305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 81 1287 - -
Adu06g00053 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 858 IPR027417 -
Adu06g00053 1305 SUPERFAMILY ABC transporter transmembrane region 962 1261 IPR036640 GO:0005524|GO:0016021
Adu06g00053 1305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 635 859 IPR003439 GO:0005524
Adu06g00053 1305 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 81 1287 - -
Adu06g00053 1305 Gene3D - 617 877 IPR027417 -
Adu06g00053 1305 SMART AAA_5 663 844 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00053 Adu-Chr6 713609 719150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00053 635 852 Calmodulin-binding Proteins AT2G36910 29.741 6.98e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00053 - - gmx:100790550 2103.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00053 06 713609 719150 Adu02g01067 02 19596205 19604166 PCT