Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00026 ATGACAAGTCGAAATTTATCGACCCAATTAAGAGCTCTTGTCGTAGATGACAACATGATCAACCGAAAGATTCATCAAAAGATGTTGAATGGTTTGGGAGTGGAATGCATGGGAGTAGCAAATGGAAAAGAAGCTGTAGATGTTCATTGTTATGGTCAAAGCTTTGACCTCATTCTTATGGACAAGGATATGCCCATCATGAATGGCATTGAGGCAACAAAAAAGCTTCGGTCAGTGGGCATTTGCAGCATGATTGTTGGTGTGTCATCACGTTCAATGGAAGTGGAAATAAGAGAATTTATGGAAGCTGGCTTAAATGATTACCATGAGAAACCATTGACAACTGCTAAGCTTGCTTCCATTATTCATCATATCATCAACACCAAGGTCTTCTATAGTTACAATGATCATTTTATTTTTGGAAAGTTCTTAAATGATCCTTTTATTTGA 450 0.3733 MTSRNLSTQLRALVVDDNMINRKIHQKMLNGLGVECMGVANGKEAVDVHCYGQSFDLILMDKDMPIMNGIEATKKLRSVGICSMIVGVSSRSMEVEIREFMEAGLNDYHEKPLTTAKLASIIHHIINTKVFYSYNDHFIFGKFLNDPFI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00026 149 Gene3D - 5 134 - -
Adu06g00026 149 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 127 - -
Adu06g00026 149 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 127 - -
Adu06g00026 149 SUPERFAMILY CheY-like 9 127 IPR011006 -
Adu06g00026 149 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Adu06g00026 149 SMART REC_2 10 122 IPR001789 GO:0000160
Adu06g00026 149 Pfam Response regulator receiver domain 13 122 IPR001789 GO:0000160
Adu06g00026 149 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00026 Adu-Chr6 352019 353846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00026 13 127 Response Regulator Gene Family AT3G04280 48.718 5.47e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g00026 Response_reg 1.9e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00026 - - adu:107491646 301.597