Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00017 ATGATGGCCCCGGTGAACATAACCTCCATAAAAACCTCCTCAAGTGGGGCGTGGCAGGGCGACGATCCCTTAAACTACGCCTTCCCTCTCCTTATAGTCCAAACCACCTTGATCCTTGTAGTCACCCGCATCCTTGCCTTCCTCTTCAAACCCCTCCGCCAGCCCAAAGTCATTGCTGAAATTGTAGGAGGGATTCTGCTAGGGCCGTCGGCATTGGGGAGGAACAAAACCTACATGAACAAGTTGTTCCCAACGTGGAGCACTCCCATACTCGAATCAGTTGCCAGCATTGGCCTCTTGTTCTTCCTCTTCCTTGTTGGACTCGAACTCGACCTCAACTCAATCCGCCGCAGTGGCCACCGCGCCTTCAGCATTGCCGCCGCCGGAATCTCTCTTCCCTTCGTCTGCGGTATTGGCGTTGCCTTCGTCCTCCGAAAGACCATCGACGGAGCCGACAAGGTCGGTTATGGCCAGTTCCTCGTCTTCATGGGCGTCGCCCTCTCCATAACCGCCTTTCCCGTCCTCGCTCGAATCCTCGCAGAGCTCAAGCTCCTCACCACGCCTGTAGGCGAGACCGCCATGGCCGCCGCCGCCTTCAACGACGTCGCGGCTTGGATCCTCCTCGCCCTCGCTGTAGCACTAGCCGGAAACGCCGACGGTAGCGGCGGCCACAAGAGCCCCGTGGTGTCCGTGTGGGTTCTCCTCTCCGGCTTGGCGTTCGTCATTTTCATGATGATGGTTATCCGACCGGCGATGAAGCTGGTGGCGCAGCGGTGCTCGCGGGAGCACGATACGGTGGACGAGGCATATATTTGCTTAACCCTTGCTGGAGTGATGGTATCGGGATTCATGACAGATCTGATCGGGATCCACTCGATTTTTGGCGCGTTCGTGTTCGGATTGACGATTCCGAAGGGAGGGGATTTTGCGGAGAGGCTGATAGAGAGGATCGAAGATTTTGTGTCCGGGTTGTTGCTGCCGCTGTACTTCGCTTCCAGTGGGTTGAAGACTGACGTGGCAAAGATACGGGGCGGGAAGGCGTGGGGGCTGTTGGTGCTGGTCATATCGACGGCGTGCGCCGGGAAAATTCTGGGGACGTTGGTGGCGGCGTTGATGTGTATGGTTCCGGTTAGGGAGGCGGTGACACTTGGCGTCCTCATGAACACCAAGGGACTCGTGGAGCTCATCGTACTCAACATTGGAAAGGAGAAAAAGGTTCTAAACGACGAGATATTTGCAATCTTGGTGCTGATGGCATTGTTCACAACCTTCATAACAACCCCAATGGTGATGGCCATTTACAAACCAGCACGTGGCATCGCCATGAAGACCCACCGCAAGCTCGGCGACTTAACCACCAACTCCGCCAGCAACGACAAGAAAGATGAGCTCCGAATCCTAGCTTGCGTCCATGGCCCCGGCAACGTCCCTTCCATCATAAGCCTCATTGAGTCAACTCGCAGCACCAAAAATTCCTTCGTCAAGCTCTTCATCATGCACCTTGTCGAGTTTACGGAGCGATCCTCCTCCATCATCTTGGTCCAACGGGTTAGAAAGAACGGCTTTCCGTTTTTTAAGCGGTCGCGCAACGGTGAGTGGCGCGACCGTTTAGCTGGGGCCTTTCAGGCCTACAGTCAATTAGGCCGGGTCTCGGTCCGGCCCACTACTGCAATCTCTTCTTTGCCTACGATGCACGAGGACATATGCCACGTAGCGGAGGAAAAGAGAGTGACCATGATCATCCTGCCGTTCCACAAGCACTGGAGGGTGGAAGCTGATGACGAGGATAATGGTGGGGCCCACGAGGTGTTGGAAAATCTGGGCCATGGATGGAGAGGGGTGAACCAGAAGGTTCTCAAGCACGCGCCGTGTTCTGTAGGCGTGCTAGTGGACCGGGGTTTTGGAAATGGGTCGCAAACTCCAGGCCCAGATAGCACGATGGGCCAACGGGTTTGCATCTTGTTCTTTGGTGGGCCGGATGATCGAGAGGCCTTGGAGTTGGGTGGGAGAATGGTTGAGCACCCTGTAGTTAGGGTCACTATTATCAGGTTTGTTGAGGAAGATGAATTGAATGGTAAAAATATTGTGTTACACCCCTCGCCAAATGCCAATTGCGACCAAAGTTATAGCTTCTCAACAGCTAAAATGAACCGTCAAATAGAGAAGGAGTTGGATGAGAAGGCAATGGGAGAGTTTCGAGGGAGATGGGGAGAGATGGTTGGGTATGTTGAGAAGGCAAGTGAGAATGTTGTGGAGGAGGCACTAGGCATAGGAAGAAGCGGAGATTTTGATCTTATAGTAGTTGGGAAGGGTAGGTTTCCGTCGAGTATGGTAGCAAATTTGGCGGAGAGGCCGGCAGAACACGCAGAGTTGGGTCCCATAGGGGATGTTCTTGCATCTTCAGGGCACGGCGTGGTGACGTCAGTGTTGGTAATTCAACAACATGATGTAGCTTTGACTGATGAGGCACCAGCATTGAGGGTGTTACATGGTGGCTATGACAATGCCAGAGGGGATAATGATTCAACATCTAGTGCTAAAGAAATTTCATCAGTTGACAACAATGATATAGTGTGA 2577 0.5363 MMAPVNITSIKTSSSGAWQGDDPLNYAFPLLIVQTTLILVVTRILAFLFKPLRQPKVIAEIVGGILLGPSALGRNKTYMNKLFPTWSTPILESVASIGLLFFLFLVGLELDLNSIRRSGHRAFSIAAAGISLPFVCGIGVAFVLRKTIDGADKVGYGQFLVFMGVALSITAFPVLARILAELKLLTTPVGETAMAAAAFNDVAAWILLALAVALAGNADGSGGHKSPVVSVWVLLSGLAFVIFMMMVIRPAMKLVAQRCSREHDTVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGDFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIRGGKAWGLLVLVISTACAGKILGTLVAALMCMVPVREAVTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPMVMAIYKPARGIAMKTHRKLGDLTTNSASNDKKDELRILACVHGPGNVPSIISLIESTRSTKNSFVKLFIMHLVEFTERSSSIILVQRVRKNGFPFFKRSRNGEWRDRLAGAFQAYSQLGRVSVRPTTAISSLPTMHEDICHVAEEKRVTMIILPFHKHWRVEADDEDNGGAHEVLENLGHGWRGVNQKVLKHAPCSVGVLVDRGFGNGSQTPGPDSTMGQRVCILFFGGPDDREALELGGRMVEHPVVRVTIIRFVEEDELNGKNIVLHPSPNANCDQSYSFSTAKMNRQIEKELDEKAMGEFRGRWGEMVGYVEKASENVVEEALGIGRSGDFDLIVVGKGRFPSSMVANLAERPAEHAELGPIGDVLASSGHGVVTSVLVIQQHDVALTDEAPALRVLHGGYDNARGDNDSTSSAKEISSVDNNDIV 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00017 858 MobiDBLite consensus disorder prediction 833 858 - -
Adu06g00017 858 PANTHER CATION/H + ANTIPORTER 5 829 - -
Adu06g00017 858 Gene3D - 30 439 IPR038770 -
Adu06g00017 858 PANTHER BNAC06G14930D PROTEIN 5 829 - -
Adu06g00017 858 Gene3D - 503 792 - -
Adu06g00017 858 Pfam Sodium/hydrogen exchanger family 38 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Adu06g00017 858 MobiDBLite consensus disorder prediction 837 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00017 Adu-Chr6 224982 233641 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00017 78 841 Antiporter Super Family AT3G53720 67.788 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00017 - - adu:107491686 1649.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00017 06 224982 233641 Adu06g00017 06 224982 233641 ECH