Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00005 ATGGCGTTCTTCAGTGGAGCTCAGCGATTTCTTTGGCAGTCTTCTTCAGTTGTGGCCTCCCACTTCACCCCTACTCGTTTCACTTCGACTCTTACTTCCCCAAAACTCTTCATCAGCGGTCTTTCAAGACTGACAACAGATGAAAAACTTACTGAAGCGTTTTCTCCTTTCGGGCAGCTGCTTGAAGCAAAGGTTATAATGGATAGAGCCTCTGGACGGTCAAAGGGATACGGATTTGTAACTTATGCAACCGTAGAAGATGCTGAAAAGGCGAGAGCCGGAATGAATGCTAAATTTATTGATGGATGGGTTATATTTGTTGATCCTGCCAAACCAAGAGAGCCCAGACCTCCTCAGCAGCCACAGTCTCAGCCCTCTGGAGCTGGTTTCACGCCCGTGGGAGCACCATCCACCTTCAACCATGGCTTGCAAGCACAACCAGTGGAAGACCACGCCCAGCCATCTCCCTCATCTTCGTCTTCTCTGAATGCCTTAACCGCTATTTACATACCGAGGAAACTAGCATCTCTCTTCTCTGTTGAGTATACGTGTAAAGGATTGATGCTAAGGTAA 573 0.4782 MAFFSGAQRFLWQSSSVVASHFTPTRFTSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQLLEAKVIMDRASGRSKGYGFVTYATVEDAEKARAGMNAKFIDGWVIFVDPAKPREPRPPQQPQSQPSGAGFTPVGAPSTFNHGLQAQPVEDHAQPSPSSSSSLNALTAIYIPRKLASLFSVEYTCKGLMLR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00005 190 MobiDBLite consensus disorder prediction 123 142 - -
Adu06g00005 190 Gene3D - 25 136 IPR012677 -
Adu06g00005 190 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 131 - -
Adu06g00005 190 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Adu06g00005 190 MobiDBLite consensus disorder prediction 110 142 - -
Adu06g00005 190 SUPERFAMILY RNA-binding domain, RBD 33 129 IPR035979 GO:0003676
Adu06g00005 190 SMART rrm1_1 35 108 IPR000504 GO:0003723
Adu06g00005 190 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 102 IPR000504 GO:0003723
Adu06g00005 190 PANTHER NUCLEOLAR PROTEIN 8 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00005 Adu-Chr6 73807 78415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00005 36 125 Eukaryotic Initiation Factors Gene Family AT3G16380 36.559 6.13e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00005 - - qsu:111989558 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00005 06 73807 78415 Adu06g00005 06 73807 78415 ECH