Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03658 ATGGAGGCTCAACTCCATGACCACACTAAACGACAAAATCCTCTAAAGCTTTTCGGCTTCAGTGTGGACCACGATGACGATGACCTTTCAACGCTCTTCGACGCAGTCTCCTCGTCCGTTTTACCTGAATCCGACGGCAGAGACGGAGGCGCGTCGGTGTTCCCTCCCTCGTCTTCCTCCTCCGGCGAAAGGAAGTACGAGTGCCAGTACTGCTGCCGCGAGTTCGCAAACTCGCAGGCTCTTGGAGGGCACCAGAACGCGCACAAGAAAGAGCGCCAACAGCTCAAGCGCGCGCAGCTCCAAGCAACGCGAAACGCCGCCGTTTCATTCGTTCGAAACCCGATCGTCTCCGCCTTCGTTCCGCCTCCTCACCTTCTTTCCCCGCCGGGGTCAGTTGTGGGCCAGTCGGGACCTCATCACCCATGGATCTACATACCGCCACGTGCTGCGGCTCCTCCTTTCCACGTGTCCGTTTCTCACGGCTGCATCTTCCCCAACAGCAATAGCAACCGAAATTTTAGTAGCTGTAACGGTAGTGGTGGAGGTGGGAATTATAGCGCTATAACGGGTGCAGGGGTGTTGCCTTACGCTGGTGGAGTAGGGGAATCCTCGCCCCCATCTACAATTATGGGCTCGCAAGTACAAGCCCGGGCCCACTATGTTAGGATTGATGGGCCTTCTTTGGATAGGTTATCGTCCAAAGGGGATAGAGGGACAAATTTGGATGATGGGTTAGGGTTGGACTTGCAGCTTGGTCTTGGCCCACCTTGA 771 0.559 MEAQLHDHTKRQNPLKLFGFSVDHDDDDLSTLFDAVSSSVLPESDGRDGGASVFPPSSSSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIVSAFVPPPHLLSPPGSVVGQSGPHHPWIYIPPRAAAPPFHVSVSHGCIFPNSNSNRNFSSCNGSGGGGNYSAITGAGVLPYAGGVGESSPPSTIMGSQVQARAHYVRIDGPSLDRLSSKGDRGTNLDDGLGLDLQLGLGPP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03658 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Adu05g03658 256 SUPERFAMILY beta-beta-alpha zinc fingers 62 93 IPR036236 -
Adu05g03658 256 Gene3D Classic Zinc Finger 51 113 - -
Adu05g03658 256 MobiDBLite consensus disorder prediction 226 256 - -
Adu05g03658 256 PANTHER ZINC FINGER PROTEIN GIS3 6 255 - -
Adu05g03658 256 MobiDBLite consensus disorder prediction 40 63 - -
Adu05g03658 256 PANTHER ZINC FINGER PROTEIN 5 6 255 IPR044299 GO:0010090
Adu05g03658 256 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03658 Adu-Chr5 109177817 109178587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03658 15 255 C2H2 Transcription Factor Family AT1G68360 44.358 7.69e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03658 - - gmx:102663095 242.276