Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03652 ATGTACCACCGAAAACGGTTCAGATCGGTGAAGTTCTACTCAATTCCTAACCGGCAAAAGAGGCCAAGGGCTGAGACACGGTGTGGATGCCCTGCAAGGATGCAGGTTCGCATGGACGATGAATTAGGACGTCGGTACGTTGCGTACTTTTCAGACGAGCATAATCACTCCGTTCTTGAATTGCGATTTTCTTCCATGCTCCCAAGCCATCGGAGGATGAGCGAAGTGGACATTGAGCAGATGAATGACATACGCAAAGGGGGCATTCCCGTATCACGAATTCACGGTTTTATGGCAAGCCTAGCCAACGGGTATTATAATGTCCCTTACACAACAAGGGATATGCACAATGTAAATGCAAAGCAACAAAGGGAGGGTGGCCTAGATGCGGAATCATGTTTAAGGTATCTCCGAGAGTTCAAGGCAAATGATCCAGCACTGTACTACAAAGAAGTTGTTGACGGGGAGGGCATGTTACAACATTTGTTTTGGTGTGATGGCACCAACAAAATTGATTACCAGGAAAATGAAGTCTGTGATCAAGCAACTTTTTTGAGAGGCGGATCCTCAACTATGTGCTTGGCACCTCCTCCGAAACACTACGAGCAACACCGGAAAGCCTAA 624 0.4696 MYHRKRFRSVKFYSIPNRQKRPRAETRCGCPARMQVRMDDELGRRYVAYFSDEHNHSVLELRFSSMLPSHRRMSEVDIEQMNDIRKGGIPVSRIHGFMASLANGYYNVPYTTRDMHNVNAKQQREGGLDAESCLRYLREFKANDPALYYKEVVDGEGMLQHLFWCDGTNKIDYQENEVCDQATFLRGGSSTMCLAPPPKHYEQHRKA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03652 207 Pfam FAR1 DNA-binding domain 17 59 IPR004330 -
Adu05g03652 207 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 174 IPR031052 GO:0006355
Adu05g03652 207 PANTHER OS02G0262500 PROTEIN 12 174 - -
Adu05g03652 207 ProSiteProfiles WRKY domain profile. 1 59 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03652 Adu-Chr5 108792230 108793074 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g03652 FAR1 2.6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03652 - - adu:107491430 366.696