Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03625 ATGGCTTTGTTGGCAACACTCTTGATTATGAGGCTTTACAGAAAAAGAAAGCAAGAATTTGATAACTCATGGAAGCTAATTTCATTTCAAAGGCTGAATTTCACAGAATCAGACATTCTCTCCTCATTAACTGAGCAGAATATTATTCGCAGTGGTGGATATGGTGCAATTTATCGTTGCCCTGTCGATGATTTCGGCTATGTTGCTGTGAAAAATATTTGGAATGACAGAAAGTTAGATCAGAAGCTCAAGAGCTCGTTCTGTTGTGCTGCATTTCAAATGAGGAATCTATGCTCCTTGTTTACGAgcaacattctcttggatgctcaattcaatgcaaaagttgcagattttggtctggctaggatgttgctcaagCCTGGTCAATTGAACACCATGTCAACTCTGATTGGATCATTTGGCTACATTGCTCCTGAATATACTCAAACAAGAAGGATCACTGAAAAAATTGATGTGTTCAGCTTTGGTGTTGTTCTGTTGGAGCTGACAACTGGCAAAGGGGCGAATGATGGAGACCAACACTTGTCTCTCGCCGAGTGGGGGTGGCGCCACATTCAGATAGGAAGCAACATAGAAGAGCTTCTAGACAAAGATGTCATGGAACCAAGCTACTTGGATGAAATGTGCACAGTTTTCAAACTTGGGGTGTTGTGTACTTCAACATTGGCTTCTACTAGGCCTTCCATGTAG 711 0.3741 MALLATLLIMRLYRKRKQEFDNSWKLISFQRLNFTESDILSSLTEQNIIRSGGYGAIYRCPVDDFGYVAVKNIWNDRKLDQKLKSSFCCAAFQMRNLCSLFTSNILLDAQFNAKVADFGLARMLLKPGQLNTMSTLIGSFGYIAPEYTQTRRITEKIDVFSFGVVLLELTTGKGANDGDQHLSLAEWGWRHIQIGSNIEELLDKDVMEPSYLDEMCTVFKLGVLCTSTLASTRPSM 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03625 236 Gene3D Transferase(Phosphotransferase) domain 1 95 236 - -
Adu05g03625 236 SUPERFAMILY Protein kinase-like (PK-like) 30 236 IPR011009 -
Adu05g03625 236 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03625 236 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 101 236 - -
Adu05g03625 236 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 101 236 - -
Adu05g03625 236 SMART serkin_6 43 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03625 236 Pfam Protein kinase domain 102 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03625 236 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 89 - -
Adu05g03625 236 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03625 Adu-Chr5 108521707 108522859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03625 88 236 Receptor kinase-like Gene Family AT5G25930 56.667 2.47e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu05g03625 Pkinase 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03625 - - aip:107641433 264.618