Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03608 ATGGCTGGGATTGATGAAAATGTTGGGGTCCCCGGGGATTGGAGTGGTCCTAGCCCGAGTCCCAGAACCTTTTTCTCTGTAATGTTAGGGGAGGATAATGTAGCAAGATCAATGTCAGACCCTCCTCCAGGTGGTGATGGAGCACAAGATGGTGATCAGAAGTTGGTGTCACGGGGTGGTCTTGTTGAGAGGATGGCAGCTAGAGCAGGGTTCAATGCACCCAGGTTGAACACTGACACCATTAGATCTACTGACCTTTCACTCAATTCTGATGTTCCTTCTCCATACTTGACCATACCACCTGGTCTAAGTCCTACCACCCTTTTAGATTCTCCGGTCTTCCTTACAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCCGTTCATCTCAAACGGCAACATATCATCCGATGCTCCTGAAAGATGCAAAGATAACAGCTTTGATGATATTTATGCATCATCCTTTGCGTTCAAGCCTACAACAGATTTAGGCTCCTCTTTTTATCAAGGCGCTGCCAGAAAAATGAATCCTACTACAATAGCTCAACAATCTCTTCCTGGTGTGGAGGTCCATGTTCAGTCGGAACATTCTTTTCAATCGCGAAGTGCTGATGTAGTAAAATCTCAAACTCAGAATAAAAATGGCCTCCATCTTCAGCCAGACTTTATTGAGTCATCTCCTCAACAGGATACTGTCGGTGTTAGCCTTGAGCATTCGCCACAACTTGAAGAGCAAGGAGATGAAGAGGGAGAGCCAAGAGGGAATGGTGACTCAATGGCTGCTGGTTTTGGTGGTGCACCATCTGAAGATGGATATAATTGGAGAAAATATGGCCAGAAGCAAGTTAAGGGTAGCGAGTACCCACGAAGTTACTACAAGTGTACACATCCAAATTGTCCTGTGAAAAAGAAAGTAGAACGATCTCATGAAGGCCACATAACAGAGATCATCTATAAGGGAGCACACAACCATCCTAAACCTCCTCCGAATCGCCGCTCAGGAATAGCTTCAGCCAACCCTCCAAGTGACATGCAAATGGACAATCCGGAGCATGTTGAACGACAAAGTGGCAGCGATGGAGAGCTGGGCTGGGCTAATTTACAGAAGGGGAATGTAGCCGGAGCTGCTAATTGGAAGAATGACAACCTTGAAGTGACATCATCAGCATCTGTTGCCCCCGAGTATTGTAACCAGTCTACCAATTCACAGGCTCAAAATGGTACTCAGTTTGACTCGGGAGATGCGGTGGATGCATCTTCTACTTTTTCTAATGAAGATGATGATGATGATCGAGGTACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAATCTAAAAGAAGGAAACTGGAATCATATGCAACAGAGTTGAGTGGAGCTACTAGAGCTATTCGCGAACCTAGAGTTGTTGTACAAACTACCAGCGAAGTAGACATCCTTGACGATGGTTATAGGTGGAGGAAATATGGGCAGAAGGTTGTCAAAGGAAATCCCAACCCGAGGAGTTACTACAAGTGCACCAATGCAGGCTGCACTGTGAGGAAACACGTTGAGAGAGCATCACATGACCTTAAATCTGTAATCACCACATACGAGGGCAAGCACAACCATGATGTTCCTGCCGCACGCTCTAGCAGTCATGTCAATGCTAACGCTTCTGGCAGTGTTCCCGGGCAAGCACCTGGCGTTCTGCAACCCCATGTTCACAGACCTGAACCAACTCAAGTTCCCGGTGGCATTGGAAGGCTTGAGAGGCCTCCTGCCCTCGGTGCATTCAACCTACCTGGGAGGCAGCAGCTAGGACCTCCACATGGCTTCTCCTTTGGAATGAATCAACCTCTTCTGCCGAACTTGGCGATGCCTGGATTCGGCCCCGGGCAATCAAAGCTTCCTGTGATGCCAGTTCATCCATTCTTGGCAACGCAACAACAACGTCCTCCTAATGAGATGGGGTTCATGTTGCCCAAGGGTGAACCAAATGTGGAGCCTATTCCTGAGCGTCATAACCTGCCCAGTGGCTCATACCAAGATCTCATGAGTCGCATGCCCCTTGGACCTCACATGTGA 2091 0.4758 MAGIDENVGVPGDWSGPSPSPRTFFSVMLGEDNVARSMSDPPPGGDGAQDGDQKLVSRGGLVERMAARAGFNAPRLNTDTIRSTDLSLNSDVPSPYLTIPPGLSPTTLLDSPVFLTNSLAQPSPTTGKFPFISNGNISSDAPERCKDNSFDDIYASSFAFKPTTDLGSSFYQGAARKMNPTTIAQQSLPGVEVHVQSEHSFQSRSADVVKSQTQNKNGLHLQPDFIESSPQQDTVGVSLEHSPQLEEQGDEEGEPRGNGDSMAAGFGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPNRRSGIASANPPSDMQMDNPEHVERQSGSDGELGWANLQKGNVAGAANWKNDNLEVTSSASVAPEYCNQSTNSQAQNGTQFDSGDAVDASSTFSNEDDDDDRGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASGSVPGQAPGVLQPHVHRPEPTQVPGGIGRLERPPALGAFNLPGRQQLGPPHGFSFGMNQPLLPNLAMPGFGPGQSKLPVMPVHPFLATQQQRPPNEMGFMLPKGEPNVEPIPERHNLPSGSYQDLMSRMPLGPHM 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03608 696 SMART WRKY_cls 271 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 SMART WRKY_cls 488 547 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 Gene3D WRKY domain 475 541 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 Gene3D WRKY domain 266 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 SUPERFAMILY WRKY DNA-binding domain 270 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 MobiDBLite consensus disorder prediction 190 241 - -
Adu05g03608 696 MobiDBLite consensus disorder prediction 400 423 - -
Adu05g03608 696 SUPERFAMILY WRKY DNA-binding domain 480 548 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 ProSiteProfiles WRKY domain profile. 272 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 Pfam WRKY DNA -binding domain 272 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 Pfam WRKY DNA -binding domain 489 545 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 ProSiteProfiles WRKY domain profile. 483 548 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03608 696 MobiDBLite consensus disorder prediction 190 277 - -
Adu05g03608 696 MobiDBLite consensus disorder prediction 665 696 - -
Adu05g03608 696 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 583 IPR044810 GO:0003700
Adu05g03608 696 MobiDBLite consensus disorder prediction 400 460 - -
Adu05g03608 696 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 75 583 - -
Adu05g03608 696 MobiDBLite consensus disorder prediction 1 59 - -
Adu05g03608 696 MobiDBLite consensus disorder prediction 320 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03608 Adu-Chr5 108387296 108390911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03608 1 691 WRKY Transcription Factor Family AT5G56270 52.660 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu05g03608 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03608 K18835 - gmx:100127395 1071.23