Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03607 ATGTCACTTCTTCTTCTTATTGTCACACTCTTGATGGCTACAGTTAAAGTTGCAGTTACATCTTCTTCTGATGCTGTTACGCTGCTTATGAGATTCAAGAACTCCCATGTCTCCTCTGATTCAAACAACTTCCTGGCTGACTGGTCCTCCTCCAAGCCCTGCACGTGGAGGGGCATCACGTGCTCCCCCCAAGGTCAAGTCACATCCATCAACCTCACCGGAGCAGGCCTCGCTGGCACCCTTGACCTCCCTACTCTCACGGCTTTGCCTTCTCTGCACCACCTTGTGTTGCGTGGCAACTACTTCTCCTTAGGGAATCTCTCTGTCTCTTCCTTCTGCGCTCTGCAGACGCTTGATCTTTCCTCCAACAACTTCTCTGGAAACTTTCCCTTCCACCAACTTCTTCCATGTCGAGCTCTCACCTATCTCAACTTGTCAAGGAATCTGATTACTGGCGCCACGGCCACCCCTTTTGGCTTCGCTGCTTCTCTGCTTCAGCTTGACTTGTCGAGGAACCAGGTTTCCCAGCCTGAGATTTTGACTTACACTCTCTCCAATTGTCAGGCTTTGACTCTGCTTAATTTGTCTGACAACCGAATCTCTGCTCAACTCAGTGAAACTAGTCTTGCTGCTTCTTGTGCCAACCTCACTACTCTCGACCTCTCCCATAATCAGCTCTCCGGGGAGTTGCCGCCGAGTTTCGTGGGGGATTCTTTGGAGCTTTTGGATCTCTCTGGCAACAACTTTTCAGGGATGTTCTCCAGGTTTGGGTTTGGGAGCTGCAGGAACCTTGTTAGGTTGAGTTTATCTCACAATGTGGTCTCTGGTGGAGAGTATCCAAGCAGCCTGAGGAATTGCCAGGCTCTGGAGACTCTGGATCTTTCTCACAATGACCTTGGACCAATCATTCCTGGGGCTCTTCTTGCAGGTCTCAAGAGCTTGAAGGAACTCTTTTTGGGGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTTGTGATTCTCTTGTGGTTCTTGATCTCTCTGATAATAAGCTTTCGGGTGAGTTGCCTTTGACTTTTGGGGACTGTTCTTCTCTGCAGAGTCTTAACCTTGCTAAGAATTATCTCCATGGAGATTTCCTCACTTCAGTTGTAAGCAAACTTTCAAGTCTTAGGTACCTTTATGTGGCATTCAATAACATCACAGGGCCTGTTCCTCTCTCTCTTGCCAATTGCACACAGCTTCAGGTTCTTGACCTCAGTTCCAATGGCTTCACCGGCACCATCCCCTCTGGCTTTTGCTCTTCTTCCTCGCCTCTCCAAAAGATGCTTCTTGCTGACAATTACCTGGAAGGGAGGGTGCCTGCGGAGCTTGGTGGCTGCAAGAATTTGAGAACAATTGATTTCAGCTTCAACAATTTGAATGGCCCTATACCCTCTCGAGTTTGGTCCCTTCCCAATCTTTCAGACTTGATTATGTGGGCTAACAACCTTACAGGAGAGATTCATGAAGGCATATGCAGCAATGGAGGAAACCTTGAGACCTTAATTCTTAACAACAATTTCATATCAGGCTCCATTCCAAGCTCAATTGCCAATTGCACCAACATGGTTTGGGTCTCACTGGCAAGCAACCACATTACCGGGGAAATACCTGCCGGAATTGGGAATCTAAAGAAACTTGCCATCCTCCAATTAGGCAACAATTCACTTGCCGGAGGGATCCCACCAGAGCTTGGGAAATGTGAAAGCCTCATATGGTTAGATTTGAATAGTAACAACCTCACCGGTACTATCCCCTCTGATCTTGCCAATCAAGCTGGCTTGGTTATGCCAGGAACTGTTTCTGGGAAGCAGTTTGCATTTGTGAGAAATGAAGGTGGGACAAGCTGCAGGGGAGCCGGAGGTTTGGTCGAATTCGAAGATATCAAGGCTGCAAGGCTTGAGAGTTTTCCTATGGTGCATTCCTGTCCATTAACTCGAATATACTCGGGCGTCACGGTCCTGAATCTGGGACACAATAAGCTGATTGGGAACATTCCAGAGAGCTTTGGTGGTCTAAAAGCAATAGGAGTGCTTGATCTCTCCCACAATAACCTTCAAGGACTCATCCCTGCTTCATTAGGAGCTCTATCTTTTCTGAGTGACCTTGATGTCTCCAATAATAACCTCACAGGCACCATTCCCACCGGTGGTCAGCTAACAACTTTCCCTTCATCTAGATACGAAAACAACTCTAATCTTTGTGGTGTTCCTTTGCCCCCTTGCCACGGCGCTTTGAATCGGAATCATGCAGCAGGTTTCCATGCTTGGAAGAAGAAGCAACCTATTGTGACCGGGATTGTGATTGGCCTTGTTTTCTTTGTCTTGTTTTTTGTTGCCTTTGTTCTTGCTTTGTATCAAGTGAAGAAGTACCATTGGAAGGAGGAACAGAGAGAAAAGTACATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAACTATCAAGCATTCCTGAGCCTCTCAGCATCAATGTTGCCACCTTTGAGAAACCACTGCGAAAGTTGACATTCGCGCATCTTCTCGAGGCTACTAACGGTTTCAGTGCCGAAACCTTGATAGGGTCTGGTGGTTTTGGTGAAGTCTACAAGGCTAAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCATGTAACAGGCCAGGGAGACAGAGAGTTCATGGCTGAAATGGAAACCATTGGAAAGATTAAGCACAGAAACCTTGTTCCATTGCTCGGTTACTGTAAAATTGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAATGGGGAAGTCTAGAGGCTGTTCTTCATGATCGTGCCAGATCGAAGCTTGATTGGGGAGCAAGAAAGAAGattgccataggttatggtgtcatacttctagagCTTTTATCCGGGAAGAGGCCGATTGACTCGTCGGAGTTTGGCGATGACAACAATCTGGTTGGATGGTGTAAGCAACTTCACAAAGAGAAAAGAAGTAGTGAAATTCTAGATCCTCACTTAATCAAGCAAGCATCTAGTGAAGGTGAACTCTACCAGTGTTTGAGAATTGCCTTTGAGTGTTTAGATGAGAGACCGTATCGGAGACCAACTATGATTCAAGTCATGGCAATGTTTAAGGAGATTCAAGCTGATACAGATAATGATGTCCTTGATGCCTTCTCTATGAAATGCAATGTCATTAAGGAAGCATAA 3231 0.4525 MSLLLLIVTLLMATVKVAVTSSSDAVTLLMRFKNSHVSSDSNNFLADWSSSKPCTWRGITCSPQGQVTSINLTGAGLAGTLDLPTLTALPSLHHLVLRGNYFSLGNLSVSSFCALQTLDLSSNNFSGNFPFHQLLPCRALTYLNLSRNLITGATATPFGFAASLLQLDLSRNQVSQPEILTYTLSNCQALTLLNLSDNRISAQLSETSLAASCANLTTLDLSHNQLSGELPPSFVGDSLELLDLSGNNFSGMFSRFGFGSCRNLVRLSLSHNVVSGGEYPSSLRNCQALETLDLSHNDLGPIIPGALLAGLKSLKELFLGRXXXXXXXXXXXXXXXXACDSLVVLDLSDNKLSGELPLTFGDCSSLQSLNLAKNYLHGDFLTSVVSKLSSLRYLYVAFNNITGPVPLSLANCTQLQVLDLSSNGFTGTIPSGFCSSSSPLQKMLLADNYLEGRVPAELGGCKNLRTIDFSFNNLNGPIPSRVWSLPNLSDLIMWANNLTGEIHEGICSNGGNLETLILNNNFISGSIPSSIANCTNMVWVSLASNHITGEIPAGIGNLKKLAILQLGNNSLAGGIPPELGKCESLIWLDLNSNNLTGTIPSDLANQAGLVMPGTVSGKQFAFVRNEGGTSCRGAGGLVEFEDIKAARLESFPMVHSCPLTRIYSGVTVLNLGHNKLIGNIPESFGGLKAIGVLDLSHNNLQGLIPASLGALSFLSDLDVSNNNLTGTIPTGGQLTTFPSSRYENNSNLCGVPLPPCHGALNRNHAAGFHAWKKKQPIVTGIVIGLVFFVLFFVAFVLALYQVKKYHWKEEQREKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHDRARSKLDWGARKKIAIGYGVILLELLSGKRPIDSSEFGDDNNLVGWCKQLHKEKRSSEILDPHLIKQASSEGELYQCLRIAFECLDERPYRRPTMIQVMAMFKEIQADTDNDVLDAFSMKCNVIKEA 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03607 1076 Pfam Leucine Rich Repeat 414 434 IPR001611 GO:0005515
Adu05g03607 1076 Pfam Leucine Rich Repeat 512 534 IPR001611 GO:0005515
Adu05g03607 1076 Pfam Protein tyrosine and serine/threonine kinase 865 958 IPR001245 GO:0004672|GO:0006468
Adu05g03607 1076 SUPERFAMILY L domain-like 337 755 - -
Adu05g03607 1076 SUPERFAMILY RNI-like 69 402 - -
Adu05g03607 1076 Pfam Leucine Rich repeat 212 229 IPR001611 GO:0005515
Adu05g03607 1076 Pfam Leucine Rich repeat 286 300 IPR001611 GO:0005515
Adu05g03607 1076 Gene3D Ribonuclease Inhibitor 136 325 IPR032675 -
Adu05g03607 1076 ProSitePatterns Protein kinases ATP-binding region signature. 868 891 IPR017441 GO:0005524
Adu05g03607 1076 Gene3D Ribonuclease Inhibitor 17 130 IPR032675 -
Adu05g03607 1076 Pfam Brassinosteroid receptor island domain 608 668 IPR045381 -
Adu05g03607 1076 SUPERFAMILY Protein kinase-like (PK-like) 846 1059 IPR011009 -
Adu05g03607 1076 PRINTS Leucine-rich repeat signature 687 700 - -
Adu05g03607 1076 PRINTS Leucine-rich repeat signature 216 229 - -
Adu05g03607 1076 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Adu05g03607 1076 PANTHER UNNAMED PRODUCT 967 1069 - -
Adu05g03607 1076 PANTHER UNNAMED PRODUCT 7 626 - -
Adu05g03607 1076 PANTHER UNNAMED PRODUCT 667 966 - -
Adu05g03607 1076 Gene3D Ribonuclease Inhibitor 331 759 IPR032675 -
Adu05g03607 1076 Gene3D Phosphorylase Kinase; domain 1 825 937 - -
Adu05g03607 1076 SMART LRR_typ_2 711 734 IPR003591 -
Adu05g03607 1076 SMART LRR_typ_2 485 509 IPR003591 -
Adu05g03607 1076 SMART LRR_typ_2 213 236 IPR003591 -
Adu05g03607 1076 SMART LRR_typ_2 558 582 IPR003591 -
Adu05g03607 1076 SMART LRR_typ_2 286 310 IPR003591 -
Adu05g03607 1076 SMART LRR_typ_2 412 436 IPR003591 -
Adu05g03607 1076 SMART LRR_typ_2 687 710 IPR003591 -
Adu05g03607 1076 SMART LRR_typ_2 388 411 IPR003591 -
Adu05g03607 1076 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 967 1069 - -
Adu05g03607 1076 Pfam Leucine rich repeat 665 724 IPR001611 GO:0005515
Adu05g03607 1076 Pfam Leucine rich repeat 341 401 IPR001611 GO:0005515
Adu05g03607 1076 Pfam Leucine rich repeat 139 200 IPR001611 GO:0005515
Adu05g03607 1076 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Adu05g03607 1076 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 7 626 - -
Adu05g03607 1076 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 667 966 - -
Adu05g03607 1076 Gene3D Transferase(Phosphotransferase) domain 1 966 1072 - -
Adu05g03607 1076 ProSiteProfiles Protein kinase domain profile. 862 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03607 Adu-Chr5 108380145 108383715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03607 3 966 Receptor kinase-like Gene Family AT1G55610 57.466 0.0 1100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Adu05g03607 PK_Tyr_Ser-Thr 3.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03607 - - gmx:100779072 1170.22