Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03597 ATGAATACATTTTGTCATGTTCCACCGGGTTTTAGGTTCCATCCAACGGATGAAGAACTCGTTGATTACTACCTTAGAAAAAAAGTTAATTCATGTAGGATTGACCTTGATGTCATCAAAGATGTTGACCTCTACAAAATCGAACCCTGGGATCTTCAAGAGCTATGCAGACTAGGAACAGAAGAGCAAAATGAGTGGTACTTCTTTAGCCATAAAGATAAAAAATATCCAACAGGAACTCGCACAAATAGAGCAACTGCAGCAGGGTTTTGGAAAGCAACAGGGAGGGACAAAGCTATATATTCCAAGCATGACTTGATTGGGATGAGAAAGACTCTCGTCTTCTACAAAGGTCGAGCCCCTAATGGCCTCAAATCTGATTGGATTATGCACGAATATCGTCTTGAAACCGATCAAACTTCGGCTGCTACTCCTCACGAAGAAGGATGGGTTGTGTGTAGAGTGTTCAAGAAGAGAGTGACTTCCATTATGCGTAAGATGAGTGATCATGATTCCCCTTCCTGCACTTGGTATGATGACTCCTCTTTCATGCACCAACAACCAGATCACTTTGACAACTCTTGTTCTTCTTCATCAAAGCACCAACTAATCCCTAATAATAACTGTGATGTCTTCTACCAACAACAAAATAACAACTTGCCTCTTCATCATCTTCCACTTCTTCATCAAACTGCTGCTCTTTCCAATCATAATAATAATCCAATCATGGCACCACCATTTGCTGCTATTAATAATAATGAAACTACTGCTTTTCAAGAACAAGGGAAAAGCTTAATTCATCATCAGGCACTACTCTATGGAAATTTAAATGAAGAGCAAGCTTCTTCTTCAGCTGCTGCTGCTGATTGGAGACTTGTTGACAAGTTTGTTTCATCACAGCTTAGAGAAGATCATCATGTCTCCAAACAAGAATTGATGATGCCAGAAAATAATAATAATAATAATAATGATAATGGTGCCTCAACATCAAACTCAAGCTGTCCAATAATGGACGTGTGGAAATAG 1026 0.3918 MNTFCHVPPGFRFHPTDEELVDYYLRKKVNSCRIDLDVIKDVDLYKIEPWDLQELCRLGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGLKSDWIMHEYRLETDQTSAATPHEEGWVVCRVFKKRVTSIMRKMSDHDSPSCTWYDDSSFMHQQPDHFDNSCSSSSKHQLIPNNNCDVFYQQQNNNLPLHHLPLLHQTAALSNHNNNPIMAPPFAAINNNETTAFQEQGKSLIHHQALLYGNLNEEQASSSAAAADWRLVDKFVSSQLREDHHVSKQELMMPENNNNNNNDNGASTSNSSCPIMDVWK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03597 341 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Adu05g03597 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 325 - -
Adu05g03597 341 MobiDBLite consensus disorder prediction 309 341 - -
Adu05g03597 341 MobiDBLite consensus disorder prediction 312 341 - -
Adu05g03597 341 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Adu05g03597 341 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Adu05g03597 341 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Adu05g03597 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03597 Adu-Chr5 108318198 108319327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03597 1 341 NAC Transcription Factor Family AT1G12260 51.657 2.50e-113 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu05g03597 NAM 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03597 - - aip:107645037 626.706