Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03593 ATGGAAGACTACTCAGAGGAAGATTATGAGTTCCTCAACCTTAGCCTTTCAGTTACTACTCCTTCTTCTAGGGAAGCCAAAATCATGAAGAAAAAGAAGAAGAACTATGAAGCCAAGATCTTGAGGCTCCTCCAACTCAGGGAAAACATGCTAAGACAAGATCACCATAACCACCATCACCACCTCCAAAGAAGAAAAGCAGGCACCAACAACAACAACAACAATCTCATCCACTTGCTCCTCACAACGGCCACCGCCATTGATGAAGACAGCAACAACATTGCTGCATCTCTTGACAATCTCACAGATCTGTACCAAACAGTTTCCCTAACAGGTGATTCAGTTGAGCGTGTTGTGGCGTACTTCGCCGATGGCCTCGCCGCGAGGCTCCTCACAAAGAAATCTCCATTCTATGACATGCTCATGGAGGAGCCAACATGTGAAGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCTTACTACCAATTCGCTCATTTCACTGCAAACCAAGCAATCTTAGAAGCCTTTGAGGAAGAAGAAGACAGGAACAACCGTTCAATCCATGTCATTGACTTTGACGTCTCCTACGGATTCCAATGGCCTTCTCTAATCCAATCACTCTCAGAGAAAGCTTCAAGCGGAAACCGCATCTCTCTAAGGATCACCGGATTCGGCACCACTCTGAAGGAGCTTCAAGAAACGGAATCCAGATTGGTGAGCTTCTCCAAAGGCTTCGGTAACCTTGTGTTTGAGTTTCAAGGGTTGTTGAGAGGGTCCAGGATCACGAATCTGAGGAAGAAGAAGAACGAGAGTGTTGCAGTGAACCTTGTTTCATACCTCAACAGTGCGAGCAACAGCAGTTTGTTGATGAATTTCTCTGACACATTGGGATTCGTTCGGTCTCTCAGGCCTTCGGTTGTGGTGTTGGTGAAGCAAGAAGGTAGCAGGAGCATTAGAACGTTCTTGTCTCGGTTCACAGAGTCATTGCATTACTTTGCCGCCATGTTTGATTCCCTTGATGATTGTCTTCCACTGGAGAGCGCAGAGAGGTTGAGGATTGAGAAGAAGCTTCTCGGGAAAGAGATCAAGAGCATGCTCAACTGTGACATGGAGATGGACGGCGTGGATTGTCCCAAGTATGAGAGGATGGAAGCGTGGAAAGCCAGAATGGAGAATCATGGTTTTGTTGCCATGAAGATGAGCTCCAAATCTCTCATGCAAGCTAAGCTTCTTCTCAAGATGAGGACTCATTATTACTATTCTCCACCACTTCAATTTGATGATGATGCCGCCGGCGGCGGTGGTGGTTTCAGGATTTCTGAAAGGGACCAGGGTAGAGCCATTTCTTTGGGGTGGCAGAATAGCCCAAATAGTCTTAGACTGCATGATCTGGCAAAGAAGAGTATTCTGGAAGAAACTAAATGTTCCGAAAATTCAGAGAGCCTGTTTAGTGCCAACATCTATCCTGTTTCTGCTGCAAAAGGCATTGATGTCAGTAATGATGGACGAATATTTGACAAGCACCTCAACCATATCGATATGGTTGTTGGTCTTGGGATTGAAGCTCATTCTGCTTCACAATTCTCAGTATAG 1602 0.4557 MEDYSEEDYEFLNLSLSVTTPSSREAKIMKKKKKNYEAKILRLLQLRENMLRQDHHNHHHHLQRRKAGTNNNNNNLIHLLLTTATAIDEDSNNIAASLDNLTDLYQTVSLTGDSVERVVAYFADGLAARLLTKKSPFYDMLMEEPTCEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEEEEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKASSGNRISLRITGFGTTLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRITNLRKKKNESVAVNLVSYLNSASNSSLLMNFSDTLGFVRSLRPSVVVLVKQEGSRSIRTFLSRFTESLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNCDMEMDGVDCPKYERMEAWKARMENHGFVAMKMSSKSLMQAKLLLKMRTHYYYSPPLQFDDDAAGGGGGFRISERDQGRAISLGWQNSPNSLRLHDLAKKSILEETKCSENSESLFSANIYPVSAAKGIDVSNDGRIFDKHLNHIDMVVGLGIEAHSASQFSV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03593 533 Pfam GRAS domain family 76 419 IPR005202 -
Adu05g03593 533 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 457 IPR005202 -
Adu05g03593 533 ProSiteProfiles GRAS family profile. 67 456 IPR005202 -
Adu05g03593 533 Coils Coil 26 53 - -
Adu05g03593 533 PANTHER OSJNBA0084A10.13 PROTEIN 13 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03593 Adu-Chr5 108264571 108268122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03593 79 457 GRAS Transcription Factor Family AT2G04890 32.124 1.96e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu05g03593 GRAS 4.8e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03593 - - gmx:100813979 615.92