Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03587 ATGATGAGTTCATCAGCAAGAAAGGAAGAAGAATATGATGACGACGATGCATGCATGTATGCGTTGTTGTTGTCAACTTTTCAAGTGTTCCCTTTCATATTGAATGCTGCTGTTGAACTCAACCTGTTTGAGATATTGTCTGAGTTAGCCCCCAACGGTGCATACTCATCGGTTTCCGAAATCGCTTCAAAGCTTCCTTCACAGCACCCTCAACTCCACAACAGGCTGGACAGAATGCTTCGTGTGCTTGCCAGTTTCTCACTTCTCAATTCGAGTGCCGTCGTCGTCGACGGCGACAAGGTTGAGAGGCTTTATAGTCTCTCACATGCTGCTAAATATTTTCTCAAAAATCAGAGTCATAATCTAGCTTTTTTCTCAAATCTCAACTGCCACCCAGCTCTAACAAGGGTTTGGGTAAACATTAAGGATGCAATTGTTGATGGAGGAATAGAGGTTTTCAAGAAGGTTAATGGGATGTCAGTGTGGGAGTACATGGTGAAGGATGCAGAACTGAGTGACACTTTCAACAAAGCAATGGCAGGAATGTCTGCCACACATATGAAGAAATACTTGGAAGCATATGATGGATTTGAAGGAGTGTCAACGCTGGTTGATGTTGGAGGAGGTACTGGACACTGCCTCAAAATGATCCTCTCCAAGTACCCTAATATTAAGGGTATTAACTTTGATTTGCCTCAAGTCATTCAACATGCCCCACCCTATCCAGGTATTGTGCACGTTGGAGGAAACATGCATGAAACTATTCCAAAGGGGGATGCCATCATGATTAAGGCTGTTTGTCATAATTGGTCAGATGAGAAGTGTGTAACAGTGCTGAAAAACTGTTATAAAGCACTTGAAGAGAATGGGAAAGTGATTATCTTTGAGATGATTATGCCTGAAGAACCAGATTCAAGCAATGCCTCTAAGCTTGTCTCTGTTGTTGACAATTCAATGTTGCTTCATGCTGGAGGCAAGGAGAGAACAGAGAAAGAATTTGGGAAGCTATGCAAAGACACTGGATTCACCACTTACCAAGTTGTTTGCCGTACTCTTTCTGTTTTCGGAGTCATAGAATTTTATAAATAA 1089 0.4206 MMSSSARKEEEYDDDDACMYALLLSTFQVFPFILNAAVELNLFEILSELAPNGAYSSVSEIASKLPSQHPQLHNRLDRMLRVLASFSLLNSSAVVVDGDKVERLYSLSHAAKYFLKNQSHNLAFFSNLNCHPALTRVWVNIKDAIVDGGIEVFKKVNGMSVWEYMVKDAELSDTFNKAMAGMSATHMKKYLEAYDGFEGVSTLVDVGGGTGHCLKMILSKYPNIKGINFDLPQVIQHAPPYPGIVHVGGNMHETIPKGDAIMIKAVCHNWSDEKCVTVLKNCYKALEENGKVIIFEMIMPEEPDSSNASKLVSVVDNSMLLHAGGKERTEKEFGKLCKDTGFTTYQVVCRTLSVFGVIEFYK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03587 362 PANTHER O-METHYLTRANSFERASE 11 362 IPR016461 GO:0008168
Adu05g03587 362 SUPERFAMILY "Winged helix" DNA-binding domain 14 118 IPR036390 -
Adu05g03587 362 Gene3D - 2 114 IPR036388 -
Adu05g03587 362 Pfam O-methyltransferase domain 138 342 IPR001077 GO:0008171
Adu05g03587 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Adu05g03587 362 CDD AdoMet_MTases 202 294 - -
Adu05g03587 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 362 IPR016461 GO:0008168
Adu05g03587 362 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Adu05g03587 362 Gene3D Vaccinia Virus protein VP39 115 362 IPR029063 -
Adu05g03587 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 360 IPR029063 -
Adu05g03587 362 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03587 Adu-Chr5 108243317 108245021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03587 11 362 Monolignol Biosynthesis Gene Families AT5G54160 50.847 8.26e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03587 - - gmx:100787536 413.305