Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03581 ATGTTTGGGGAGTCATCAGGAAGGTGGTTGGATTCTGAATTATGGCATGCTTGTGCTGGTTCCATGGTTCAAATGCCACCTCTGAACTCAAAAGTTTTGTACTTTCCACAAGGGCATGCAGAGCATGCTCATGGAGGAAAAGTGGATTTCACAACAAGAATCCCTTCTTTCATTCCATGCTGGCTTTCTGGACTCAAATACATGGCAGATTCTGATACTGATGAGGTCTTTGTTAAGTTGTCTTTGACCCCTCTCACTCAAGAAAACACCAATGCATTGTTAATGGATTTGGAAGATGGTGGTGATGATTGTGGTAACAACAATGGAGGAGTTGTTGAGGGGGGTCATCAAGAGAAACCTGCTTCATTTGCAAAGACATTGACACAATCTGATGCCAACAATGGTGGAGGGTTCTCAGTGCCTCGTTACTGTGCTGAAACCATATTCCCAAGGCTGGATTATTCTGCTGATCCTCCTGTTCAGAACATTGTTGCCAAAGATGTTCATGGAAATTGCTGGAAGTTTAGGCACATCTATAGAGGGACTCCTCGCAGGCACCTATTGACCACTGGATGGAGCAATTTTGTGAGCCAGAAGAAGCTTGTAGCTGGTGATTCCATTGTGTTCTTGAGAGCTAAGGATGGTGATCTGTGTGTTGGGATAAGGAGGGCCAAGAAGGTGGCAGTTGGAGACGGCGAGGTGTCGGTGTCATCGGTGGTTGAAGCTGTGAGTTGTGGTGTTAATGGAAGGCCATTTGAGGTTGTGTACTATCCAAGGGGAAGCTCACCTGAGTTTTGTGTTAAGGCCTCAGTTGTGAGAGATGCAATGAAAGTGAGGTGGTGTTCTGGGATGAGGTTCAAGATGCCCTTTGAGACTGAGGATTCTTCTAGAATCAGTTGGTTCATGGGAACCATTTCTTCTGTTCAGCTTCTTGATCCCATTCATTGGCCTAATTCTCCATGGCGTCTTCTGCAGGTGGTGTGGGATGAACCAGAATTACTACAGCATGTGAAGTGTGTAAATCCTTGGTTGGTTGAATTAGTCTCAGACATTCCCACCTACCATCTTTCTCCATTCTCTCCAACAAGAAAGAAACCAAGGTTTCTTCACAACCAAGATTTTCACCTCATCAATAACCAACTTCCAATAATGCCAGGATTTCCCAGCAATTATAGTTACAGTAATGATAATCATCTTGTTATGAATCATTCTTCTAAGTCCTTAATGATGAACATTCAAGAGAATAACAGTATTGCAGGCATACAGGGAGCCAGGCATGCTCAACTTCTTGATCTGTCTCCATCTGATTATCCTTTCTTCAACAAGCTTCCATCACAATCACAATCACAATCACAATCACAATCACACAATATGCATCTTATTAGTCCCCCTTATTGTGGGACCTATAAGAACAACAATGCTGATATATCTTGCTTGTTAAGTGTTGGAAATTCTAGCCATAATTTAAAAGAAGAACACAATGAAGAAGTGAAATCATCATCACCACCATCCCATATCTTCTTGTTTGGACAACTGATTCACACTGAACAGCAATGTTCAAACGGTGGCAGTTCTAGCTCAAATGGGAACAATTCATCTGATGAAGGGACTTTGCTGAAGATGAAATCAAATAATGCTTCTGAATTGCATCTAAATAGTAGTCCAGTAGAGAAGAACCCTTCTTCTAATGGAGGGTCTCCCTGGTACAAAGATCAGCACAAATCTGGTCTTGGAACAGAAAATGTTAATCTACTTTGCTTGGCTCTATAG 1770 0.4237 MFGESSGRWLDSELWHACAGSMVQMPPLNSKVLYFPQGHAEHAHGGKVDFTTRIPSFIPCWLSGLKYMADSDTDEVFVKLSLTPLTQENTNALLMDLEDGGDDCGNNNGGVVEGGHQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNIVAKDVHGNCWKFRHIYRGTPRRHLLTTGWSNFVSQKKLVAGDSIVFLRAKDGDLCVGIRRAKKVAVGDGEVSVSSVVEAVSCGVNGRPFEVVYYPRGSSPEFCVKASVVRDAMKVRWCSGMRFKMPFETEDSSRISWFMGTISSVQLLDPIHWPNSPWRLLQVVWDEPELLQHVKCVNPWLVELVSDIPTYHLSPFSPTRKKPRFLHNQDFHLINNQLPIMPGFPSNYSYSNDNHLVMNHSSKSLMMNIQENNSIAGIQGARHAQLLDLSPSDYPFFNKLPSQSQSQSQSQSHNMHLISPPYCGTYKNNNADISCLLSVGNSSHNLKEEHNEEVKSSSPPSHIFLFGQLIHTEQQCSNGGSSSSNGNNSSDEGTLLKMKSNNASELHLNSSPVEKNPSSNGGSPWYKDQHKSGLGTENVNLLCLAL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03581 589 SMART B3_2 123 225 IPR003340 GO:0003677
Adu05g03581 589 Gene3D - 279 352 - -
Adu05g03581 589 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 232 550 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu05g03581 589 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 230 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu05g03581 589 MobiDBLite consensus disorder prediction 550 574 - -
Adu05g03581 589 Pfam B3 DNA binding domain 123 224 IPR003340 GO:0003677
Adu05g03581 589 Gene3D - 121 225 IPR015300 -
Adu05g03581 589 MobiDBLite consensus disorder prediction 550 569 - -
Adu05g03581 589 Pfam Auxin response factor 248 325 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu05g03581 589 PANTHER AUXIN RESPONSE FACTOR 16 232 550 - -
Adu05g03581 589 PANTHER AUXIN RESPONSE FACTOR 16 6 230 - -
Adu05g03581 589 SUPERFAMILY DNA-binding pseudobarrel domain 118 225 IPR015300 -
Adu05g03581 589 MobiDBLite consensus disorder prediction 518 538 - -
Adu05g03581 589 CDD B3_DNA 122 223 IPR003340 GO:0003677
Adu05g03581 589 ProSiteProfiles B3 DNA-binding domain profile. 123 225 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03581 Adu-Chr5 108204132 108207137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03581 10 521 B3 DNA Binding Superfamily AT2G28350 51.736 5.14e-179 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu05g03581 B3 2.1e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03581 - - adu:107491554 1164.06