Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03578 ATGGAAATTAAGATAACATGTAGAGAAAGCATTAAACCATCATTACCCACTCCCCAAGAGCACAAAAAGCACAAACTATGTTTATTCGATGTGTATCAACTTAACACCTATTTTCCACTAATCCTATTTTACCACAAAGGATCTTCAGACATTTTAACACAATTGAAGAAATCACTATCCGAGGCACTAACAATTTTCTACCCTCTTGCAGGTAGAAAGAGTAGTGATGATCCCTTTTCAATCAATTGCAATGATGAAGGTGCAATCTACATAGAATCCACAATAGTGAACATCACCATTGAAGAGTTCCTCAACCCTCCAAAACTAGAATTGCTTAACGAATTGCTTCCTTGTGAGCCAAACAAGACTCACCCTAACCATGAAGTGTTGCCACAGTTAGTGATCCAAGCCAACACTTTCAAGTGTGGCGGAATAGCTGTTGCAATGTGCAACCTCCACACACTCTTGGATGCTTCTTCTTGCATCACTTTCTTGAAGACTTGGTTTGCAATTTCTAGAGGGTCAGCGGAAGAGATATCATTTCCTAATTTCTCTTCCGCTCCTTCTCTGTTCCCGCCGAGGGTGAACACCTCTGGGTTGATGCGTTCGGGGGTGCTCAACCTCGGCAGGGACATAGAAATTGAAACACTCTGCACCACAAGAAGATTCTTGTTTGATTTCAAAGCCATGAATGAGCTCATATCCAAGGCTGCATTAGGAAATAATGGAAGAATGATGAACACAAACCCTACAAGGTACCAAGCAGTGTCATCATTCATATGCAAACACATGATTATGTCATGCATGAAAGAAGAAGACAAGAATAGGCCAGTGGTAGTGCTGCATGTTGTGGACATGAGGAGAAGAATGGGAGAACCCTTCACACAAAACTCCATTGGGAACTTGCTGTGGCCAGCAGTGATGCTATGTGAGAATGTGAACAAGGACACTGAGATAAGTGAATTGGTAAAGGTGTCAAAGGGTGGAATTGGGAAAGTGACAAAGGAATTGCTGGTGAGAGTTCAAAAGGATGAAGGGTTTTGGTGGAGTGATGAGTGTGGCAAGTTGATGCTTGAAGAGGTGGTGAACAAAGATCCGGTGTCGTTTTTGTTCACAAGTTGGTGTGATATGGGATTCAAAGAGTTGGATTTTGGGTTGGGAAAACCTTTGTGGTTGGCTCAGAAAGGTGGCAATAGTGAAACAATTCCAAACACAGTGGTTTTCATGGACACAAAGGATGGAATGGAAGCATGGATCTCAATGAGACCCCAACACATTGCTACATTGGAAAATGATGTGGATTTTCTCAAATTTGCTCTGCTTAATCCTACTGGTTCAATTCTATTAAAGTAA 1353 0.4169 MEIKITCRESIKPSLPTPQEHKKHKLCLFDVYQLNTYFPLILFYHKGSSDILTQLKKSLSEALTIFYPLAGRKSSDDPFSINCNDEGAIYIESTIVNITIEEFLNPPKLELLNELLPCEPNKTHPNHEVLPQLVIQANTFKCGGIAVAMCNLHTLLDASSCITFLKTWFAISRGSAEEISFPNFSSAPSLFPPRVNTSGLMRSGVLNLGRDIEIETLCTTRRFLFDFKAMNELISKAALGNNGRMMNTNPTRYQAVSSFICKHMIMSCMKEEDKNRPVVVLHVVDMRRRMGEPFTQNSIGNLLWPAVMLCENVNKDTEISELVKVSKGGIGKVTKELLVRVQKDEGFWWSDECGKLMLEEVVNKDPVSFLFTSWCDMGFKELDFGLGKPLWLAQKGGNSETIPNTVVFMDTKDGMEAWISMRPQHIATLENDVDFLKFALLNPTGSILLK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03578 450 Pfam Transferase family 1 435 - -
Adu05g03578 450 Gene3D - 1 199 IPR023213 -
Adu05g03578 450 Gene3D - 217 437 IPR023213 -
Adu05g03578 450 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 444 - -
Adu05g03578 450 PANTHER F21J9.9 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03578 Adu-Chr5 108160947 108162434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03578 3 430 Monolignol Biosynthesis Gene Families AT5G48930 22.940 1.11e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03578 - - ahf:112804060 889.412