Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03560 ATGGCAGCTTGGATTCTTGGTGTTAAAAATCTATCAATTCAACCATATCCACTTCCTTCTTTAAGTCCCCATGATGTTACAATTAGAATTAAAGCTGTTGGTATTTGTGGAAGTGATGTTCACTACTATAAGACTATGAGATGTGCAAATTTTATTGCCAACAAGCCGAAGGTACTAGGGCATGAATGTGCTGGAATCGTTCAAGAACTTGGCACTCAAGTCCAATCTCTTGCAGTAGGGGACAAGGTAGCCTTAGAGCCTGGAATCAGTTGCCAAACATGCAATTTCTGCAAAGGTGGCCGCTACAATCTCTGTCGTGGCATGAAATTTTTTGGATCAGCATCAACTCACGGTTCTCTTGCCAATATGGTGGTGCATCCTGCCAATGTGTTTCAAGCTACCTGA 405 0.4222 MAAWILGVKNLSIQPYPLPSLSPHDVTIRIKAVGICGSDVHYYKTMRCANFIANKPKVLGHECAGIVQELGTQVQSLAVGDKVALEPGISCQTCNFCKGGRYNLCRGMKFFGSASTHGSLANMVVHPANVFQAT 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03560 134 Pfam Alcohol dehydrogenase GroES-like domain 23 129 IPR013154 -
Adu05g03560 134 SUPERFAMILY GroES-like 2 130 IPR011032 -
Adu05g03560 134 PANTHER SORBITOL DEHYDROGENASE 1 130 - -
Adu05g03560 134 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 60 74 IPR002328 GO:0008270|GO:0016491
Adu05g03560 134 Gene3D - 1 133 - -
Adu05g03560 134 PANTHER L-IDONATE 5-DEHYDROGENASE 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03560 Adu-Chr5 108058470 108059469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03560 20 126 Monolignol Biosynthesis Gene Families AT1G72680 32.174 3.01e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03560 K00008 - adu:107491572 281.182