Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03549 ATGGCTGCTGAGGAATCTGCTAAATGTAAAGCTGCAAAAGAAGTTAGAAAGTCGCTTACAGCACAGCTCAAAGGTTTTGCTGAGAAGCTCCCACCTGGAGCTTATGATGCTGAGAACATCAAACCGGCTTACCTACCAAACAGTATTGAGCCAAATGGACTGTCTACTAATAGCATTCAGATTGAGGCAGAATGGATTGAACAGTATGAACCTGGTGTCTATATAACACTTGTTGCGCTGCGTGACAGAACAAGAGATTTGAAGCGAGTTTGTTTCAGCCGGAGAAGATTTGGAGAGCATCAAGCAGAGACTTGGTGGTCAGAGAATCGGGACAAGGTATACGAAAGGTACAATGTTCGTAGCACAGACAAGTCTTCCAACCAAGCGGGGGAGCCGCATAGGACAGAAGGTGCTGGTCCTCTTGTTTCCCAATCATAG 438 0.4589 MAAEESAKCKAAKEVRKSLTAQLKGFAEKLPPGAYDAENIKPAYLPNSIEPNGLSTNSIQIEAEWIEQYEPGVYITLVALRDRTRDLKRVCFSRRRFGEHQAETWWSENRDKVYERYNVRSTDKSSNQAGEPHRTEGAGPLVSQS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03549 145 Pfam Transcription factor regulating root and shoot growth via Pin3 62 117 IPR013591 -
Adu05g03549 145 MobiDBLite consensus disorder prediction 118 145 - -
Adu05g03549 145 ProSiteProfiles BRX domain profile. 63 118 IPR013591 -
Adu05g03549 145 Pfam Transcription factor BRX N-terminal domain 4 39 IPR027988 -
Adu05g03549 145 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 57 - -
Adu05g03549 145 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 57 125 - -
Adu05g03549 145 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 57 - -
Adu05g03549 145 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 57 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03549 Adu-Chr5 107990757 107992641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03549 64 128 Major Intrinsic Protein MIP AT1G31880 47.692 1.06e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03549 - - adu:107490830 177.563