Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03537 ATGGCGGGAGCTACAGCAAGAACCCTCTTCTTCACCGTCTTTCTCTCTTCCTCCTCCTTCACGCGCCTCTCTCGTCGCTCCAATCTCATCCCACTCCTCACGCGCTCTAAGTCCATCATCAATGTTCCGCCGCCACGGTTCAGGACCTTGTGTTCCGTCGCCACCGCACCGGAAACTTCGGACACCGATCACCAGACGAAGCACTCCGTCCTCCTCGAGAAGCTCAGAGCGAGACATCTCAAGGACAGTGCAAAGAGCTCAGAACTCAAGAGTAAGGACCAAACAAAGAAGAATTCTTCTTCTTCTTCTGGTGAAAGTGAGAATTTTGATGGGGTGGTGGTGAAAAAGAATAAGCTTGTTGGGAGTTTTGAAGAATTGGGTTTGAGTGAAGAGGTTATGGGTTCTGTTAGGGAAATGGGTATTGAAGTTCCCACTGAGATTCAGTGTATTGGTGTTCCTGCTGTCTTGCAAGAGAACAGTGTTGTGTTGGGTTCTCACACTGGCTCTGGCAAAACCCTTGCTTACTTGCTTCCCCTTGTTCAGTTGCTAAGACGGGACGAACAGTTGAATGGAATACAGTTAAAGCCCAGGAGACCTCGTGCTGTTGTGCTATGCCCTACGAGGGAGTTGTGTGAGCAGGTTTTTCGAGTTGCGAAATCAATTAGCCATCATGCACGGTTCAGGTGCACAATGGTAAGTGGTGGTGGCCGTATTAGGCCTCAAGAGGATTCACTTAATAACCCCATTGATATGGTAGTTGGTACCCCTGGAAGGATTCTTCAACATATTGAGGAGGGCAACCTGGTGTATGGCGACATCAAATACTTGGTATTGGATGAGGCAGATACAATGTTTGATCGTGGCTTTGGTCCTGATATACGCAAATTTCTGGCCCCATTGAAACATCGTGCGTCAAAGTCTGATGGCCTAGGTTTTCAGACCGTCTTGGTAACTGCAACAATGACAAAGGCTGTGCAAAAGCTAATTGATGAGGAGTTTCAGGGCATTGTACATCTGCGAACATCAACATTGCATAAAAAGATTTCTTCTGCTCGTCACGATTTTATTAAACTTTCAGGTTCTGAGAACAAGCTGGAAGCATTACTTCAGGTACTTGTGCCAAGCCGAGCAAAAGGCAACAAGGTGATGGTTTTTTGCAATACTTTGGACTCTAGCCGTGCGGTGGATCACTACCTTGTTGAAAATATGATTCCTACTGTCAACTACCATGGGGAAACTATCTCCCATTTCCTGCTCTTCCATATTCCCATTTACTTATTTGCATCATCAATTTTTTTTTTTTTCCACAGGGTTGAAAACCTCAATAAGTTTAAGAATGACATTGATGATCGTCCAACATTAGTTTGCACAGACTTGGCCGCTAGGGGTCTGGACTTGGATGTAGATCATGTTGTTATGTTTGACTTCCCCTTGAACTCTATCGATTACCTTCATCGGACTGGTAGAACTGCTCGTATGGGTGCAAAAGGGAAAGTAACCAGTTTGGTTACAAAGAAGGACTTGATCTTGGCCACTAGAATAGAGGAGGCAATGAGGAAGAATGAGAGTTTGGAAGCTATCACCAAAGAAGGAGTACGAAGGGATATCGCCAGGACCCAAGTTAATGGGCAGAGTGGGAAGGACAGAAAACTAGTTAAAGTTTCTAAAGTTAAGAACAATCCTGGTGGACGTGCCAGTTCAGGGAATAAAGGATCGGATTTGAAATCCCGAAAAGGATCATCTTCAGAAAGATCTATGAAGAAAGGGATTAAGGTTTCAAATTCTGTAAAATCCTCCAGTGCAAATGGCTCAAGAAAAGCTTCTTCAGGGTATAAGCAAACAAGTAAAAGGACCAGTGCCACCAAATCGACAAATTCTAAACTCAGTGTTGTCGGGTTTAGGGGTCGGAACTCATCATCAAACCCCTTGTGA 1932 0.4493 MAGATARTLFFTVFLSSSSFTRLSRRSNLIPLLTRSKSIINVPPPRFRTLCSVATAPETSDTDHQTKHSVLLEKLRARHLKDSAKSSELKSKDQTKKNSSSSSGESENFDGVVVKKNKLVGSFEELGLSEEVMGSVREMGIEVPTEIQCIGVPAVLQENSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGIQLKPRRPRAVVLCPTRELCEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKHRASKSDGLGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKISSARHDFIKLSGSENKLEALLQVLVPSRAKGNKVMVFCNTLDSSRAVDHYLVENMIPTVNYHGETISHFLLFHIPIYLFASSIFFFFHRVENLNKFKNDIDDRPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVTKKDLILATRIEEAMRKNESLEAITKEGVRRDIARTQVNGQSGKDRKLVKVSKVKNNPGGRASSGNKGSDLKSRKGSSSERSMKKGIKVSNSVKSSSANGSRKASSGYKQTSKRTSATKSTNSKLSVVGFRGRNSSSNPL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03537 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 334 IPR027417 -
Adu05g03537 643 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 152 339 IPR014001 -
Adu05g03537 643 MobiDBLite consensus disorder prediction 586 643 - -
Adu05g03537 643 MobiDBLite consensus disorder prediction 538 643 - -
Adu05g03537 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 272 519 IPR027417 -
Adu05g03537 643 SMART helicmild6 412 494 IPR001650 -
Adu05g03537 643 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 121 149 IPR014014 GO:0003724
Adu05g03537 643 CDD SF2_C_DEAD 352 503 - -
Adu05g03537 643 Pfam DEAD/DEAH box helicase 145 328 IPR011545 GO:0003676|GO:0005524
Adu05g03537 643 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 364 536 IPR001650 -
Adu05g03537 643 MobiDBLite consensus disorder prediction 82 108 - -
Adu05g03537 643 SMART ultradead3 140 359 IPR014001 -
Adu05g03537 643 Pfam Helicase conserved C-terminal domain 364 494 IPR001650 -
Adu05g03537 643 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 45 569 - -
Adu05g03537 643 Gene3D - 350 536 IPR027417 -
Adu05g03537 643 MobiDBLite consensus disorder prediction 560 575 - -
Adu05g03537 643 CDD DEADc 132 331 - -
Adu05g03537 643 Gene3D - 78 340 IPR027417 -
Adu05g03537 643 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 45 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03537 Adu-Chr5 107916178 107919672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03537 120 516 Eukaryotic Initiation Factors Gene Family AT3G19760 27.407 7.92e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03537 - - vun:114182370 834.713