Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03516 ATGTGCTTAGTAACAACGGTGGCGCATCAAAGGGGGTCAGGTGAGTTCATCCGGTTCACGGCGCAGCGTGGCGGTGACGGCGGAGATGAGGAACACGGCGGCGGCGGTGGTGGAAGAAGAAGCAGATCATATGAACAAGAAGTAGGTAACAAGAAAGAAGATGAGGTGGAAAGAATAACAATGCAAGGTTCAATGGAATTGAGTGAGATCATGCTTTCGGCGCTGACAAATAATGTTGTGTCATCAGGTTCTTCTTCTTCTCAATCTCATCAAAGCGGCACCGACTGGTTTGCTGCTGCTTCTCAGCATCATCCTATGATGACGTCAGATTTTGGACACGTGTCATCTTTGTCTTCTTTTACTTCTTCATCTTCTTCTTCTGCTTCTGCTTCCTCTTCATGGGTTGGCCAAAAGAGAGGGCGTGAAGAACAACACCACATGATTGGTGCTTCATCTTCATCTTCTTCTTCCTCTTCTCAATCTTATCAATATCAACATCAACATCATCAGAATTTGGTTCAACATCCTGTTCCTAGATTCTTTGGAACCATTCTTGGTGACTTCAAGGTGCTACCTTCTCATCAACCAGAATCATCTTCAGCAGTGACAGAAGAAGCTTCTTCCATCACCACGGCGGCCACGGCAGCCACCGTAACCACCATGACACCGGCAACGCCGTCGAGCGAGGCGGCATCATATGAAGAAACAGGGGAGAGAAGGAGAAGGTACAGAGGAGTTAGGCAAAGGCCATGGGGAAAATGGGCAGCGGAGATTCGAGATCCACACAAGGCGGCAAGAGTGTGGCTCGGAACATTCGACACGGCGGAAGCCGCCGCAAGAGCCTACGACGAAGCCGCATTGAGATTCAGAGGAAACAGAGCAAAACTCAATTTTCCAGAGAATGTAAGAGCAGTGCCACGCCCAATTCAACCACCTTTCTCTGCCGCCGCCGCCACAACCACCGCCACCACACATTTCCACCACCCTCCGCCGCAGATGTACCATCCAGAACCACTACCACCACCACCATTGGTTCAACATCAGCAGCCACAGTTTCAGGGAAACAATGAGATCAGAGACTATTTGGAATATTCTCTGCTTCTTCAGAGTTCTGGTGATTTTCATCAACATCAACAACAACAAATTAATCAACAACCTTCGAATTTGTTACAACAGTTGTACTATAATTCACAATTGGCGGCGCTTCAATCTTCTTCTTCATCATCATCTTCTTCTTCAGTTGTGCCACCAGCTTCGGTGTTTTCAGCTTCCGCTCAACCTTCCTCTGCTTCACTTCCCCTGTTTCCTAGTCAGCAAATGGTGTTTTTCCGGCCACCGGGAAACCAACCTCACGGCGGCGGAGACGGTGCCGGCGGGTTAAACTTTCTCCCTTCAACTTGGTCAGATACCAGTGGCTATCCACCACCACCTGGTTGA 1437 0.4892 MCLVTTVAHQRGSGEFIRFTAQRGGDGGDEEHGGGGGGRRSRSYEQEVGNKKEDEVERITMQGSMELSEIMLSALTNNVVSSGSSSSQSHQSGTDWFAAASQHHPMMTSDFGHVSSLSSFTSSSSSSASASSSWVGQKRGREEQHHMIGASSSSSSSSSQSYQYQHQHHQNLVQHPVPRFFGTILGDFKVLPSHQPESSSAVTEEASSITTAATAATVTTMTPATPSSEAASYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRAVPRPIQPPFSAAAATTTATTHFHHPPPQMYHPEPLPPPPLVQHQQPQFQGNNEIRDYLEYSLLLQSSGDFHQHQQQQINQQPSNLLQQLYYNSQLAALQSSSSSSSSSSVVPPASVFSASAQPSSASLPLFPSQQMVFFRPPGNQPHGGGDGAGGLNFLPSTWSDTSGYPPPPG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03516 478 MobiDBLite consensus disorder prediction 24 55 - -
Adu05g03516 478 MobiDBLite consensus disorder prediction 320 350 - -
Adu05g03516 478 MobiDBLite consensus disorder prediction 222 241 - -
Adu05g03516 478 MobiDBLite consensus disorder prediction 115 170 - -
Adu05g03516 478 MobiDBLite consensus disorder prediction 147 170 - -
Adu05g03516 478 ProSiteProfiles AP2/ERF domain profile. 242 299 IPR001471 GO:0003700|GO:0006355
Adu05g03516 478 PRINTS Ethylene responsive element binding protein signature 243 254 IPR001471 GO:0003700|GO:0006355
Adu05g03516 478 PRINTS Ethylene responsive element binding protein signature 265 281 IPR001471 GO:0003700|GO:0006355
Adu05g03516 478 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 71 439 - -
Adu05g03516 478 Pfam AP2 domain 242 291 IPR001471 GO:0003700|GO:0006355
Adu05g03516 478 SUPERFAMILY DNA-binding domain 242 300 IPR016177 GO:0003677
Adu05g03516 478 Gene3D AP2/ERF domain 241 301 IPR036955 GO:0003700|GO:0006355
Adu05g03516 478 MobiDBLite consensus disorder prediction 331 347 - -
Adu05g03516 478 CDD AP2 250 301 IPR001471 GO:0003700|GO:0006355
Adu05g03516 478 MobiDBLite consensus disorder prediction 19 55 - -
Adu05g03516 478 PANTHER DNA-BINDING DOMAIN 71 439 IPR044808 GO:0003700|GO:0009873
Adu05g03516 478 MobiDBLite consensus disorder prediction 115 137 - -
Adu05g03516 478 MobiDBLite consensus disorder prediction 441 478 - -
Adu05g03516 478 SMART rav1_2 242 305 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03516 Adu-Chr5 107731767 107734263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03516 196 311 AP2-EREBP Transcription Factor Family AT2G33710 51.163 2.90e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu05g03516 AP2 9.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03516 - - ahf:112803013 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03516 05 107731767 107734263 Adu05g03516 05 107731767 107734263 ECH
Adu06g02230 06 93204439 93207642 Adu05g03516 05 107731767 107734263 PCT
Adu05g03516 05 107731767 107734263 Adu09g03080 09 118624573 118626284 PCT