Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03497 atggaattggatctacacgttttcctcagtttcagaggagaagatactagaaacggtttcactagtaatctctaccatgcactggatcaaaaggggatccacaccttcattgatgatgaggagcttcaaaagggggaagaaattactccatcacttgtgaaggctattcaagaatctaggattgccatcgttgtgttctctaagaactatgcatcatctactttctgtttggacgagcttgcaaagattattgagctgttgaaacttgaaggaagattggtttggccaatcttttatgatgtggatccatcagatgttcgccatcagaaaggtagctatgcggaggcattagcaaaacatgaagaacggttccagaatgatgacaatggcaaggtacaaaaatggaggaatgctctacgtgaagcagctaatttgtccggttcacatttcaaaCCAGGGTCTCAACAGGAATACAAGTTTATTGAAAACATTGTTAGTGACATCTCCAAAAAGCTGAATTACACTCCTTTACATGTTGCTGACAACCCGGTTGGCCTGGAATCGCAAGTGCTAGAAGTGAAGTCTCTGCTACAACTTGGGTCTAATAATGTTGAAGATGGAGGAGTACACATGGTTGGGATTTGTGGAAGTGGGGGAATAGGTAAAACAACACTTGCAAGAGCTGTGTATAACTCTGTTGCTGATCAATTTGATGGTTTGTGTTTTCTTGCTGATGTTAGAGAAAATGCAATCAACAAGAATCATGGTCTTGCACAACTCCAAGAGACACTTCTTTCTGAAGTTCTTGATGAGAGTAATATAAGAATAAGAGATGTAAACAGAGGGATTCCATTGATAAAAAGGAGGCTTCAACAAAAGaagattcttttgattcttgatgatgttgatgacttaacccagttaagcgctattgccggaggcgatgattggttcggttcaggtagtcggataattatcacttctagggacaaacatttgttagaagcacaatatgggatgaattcaaacaagatttatgaggtcaaagagttaaacaaaaaagcagctcttgaattgttctgttggaaggcctttagaagcaacaaagttaagtcagggtatgaagatatttcaaaccgtgttctttcttatgctggtggtgttcctttggctttggaattaataggctctaacttgtataacaagagcatagatcaatggagctctgcattagataagtacaaaaaaattcccattaagaagattcaagaagtgcttgaggtaagttatgatggattacatgaagatgagaagagtatttttcttgatatagcttgtttcttcaacaaggaaaagatatcatatgtgaagcaaatgctacatatccgtggtttccaccctgaagatggtattgacgttttgattgacagatctttgatgaagattgacaagaataataattgtgtgagaatgcatgatttgattcaagatatgggtagaGAAATTGTTAGAAGGGAATCAACTTCTAAGCCTGGCAAACGTTCTAGACTATGGAATGATGAGGACATTGTTCATGTTCTAGAAAATGACATGGGAAGTGATAGAGTTGAAGTCATAACTTTGCACTCAAGCAAGCGTAGAGTGAATTGGAATGGAAAAGCATTCAAGATAATGAGGAATCTCAAAGTTCTCATATTCTGGGATGTACATTTTTCAGTTGGTCCTGATCATCTGCCAAACAGTTTAAGAGTGTTGGAGTGGGATGGATATCCATCACCATCATTACCCTCTGATTTTCATCCCACTAAACTCTTCATACTCAATTTGTGCAACAGTTCTCTCAAATTGGACAATCCACTCCAGGCATGCATCATTTCCTACTATTTTACTCAATCAAATATGTTTATTCGTGTAACAATTCTCAACTATCATCTTCATGTTTTTTTATGCAGAATTTCAATTCCTTGA 1968 0.1728 MELDLHVFLSFRGEDTRNGFTSNLYHALDQKGIHTFIDDEELQKGEEITPSLVKAIQESRIAIVVFSKNYASSTFCLDELAKIIELLKLEGRLVWPIFYDVDPSDVRHQKGSYAEALAKHEERFQNDDNGKVQKWRNALREAANLSGSHFKPGSQQEYKFIENIVSDISKKLNYTPLHVADNPVGLESQVLEVKSLLQLGSNNVEDGGVHMVGICGSGGIGKTTLARAVYNSVADQFDGLCFLADVRENAINKNHGLAQLQETLLSEVLDESNIRIRDVNRGIPLIKRRLQQKKILLILDDVDDLTQLSAIAGGDDWFGSGSRIIITSRDKHLLEAQYGMNSNKIYEVKELNKKAALELFCWKAFRSNKVKSGYEDISNRVLSYAGGVPLALELIGSNLYNKSIDQWSSALDKYKKIPIKKIQEVLEVSYDGLHEDEKSIFLDIACFFNKEKISYVKQMLHIRGFHPEDGIDVLIDRSLMKIDKNNNCVRMHDLIQDMGREIVRRESTSKPGKRSRLWNDEDIVHVLENDMGSDRVEVITLHSSKRRVNWNGKAFKIMRNLKVLIFWDVHFSVGPDHLPNSLRVLEWDGYPSPSLPSDFHPTKLFILNLCNSSLKLDNPLQACIISYYFTQSNMFIRVTILNYHLHVFLCRISIP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03497 655 Gene3D - 2 176 IPR035897 -
Adu05g03497 655 Gene3D - 177 341 IPR027417 -
Adu05g03497 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 444 IPR027417 -
Adu05g03497 655 ProSiteProfiles TIR domain profile. 3 172 IPR000157 GO:0007165
Adu05g03497 655 SUPERFAMILY "Winged helix" DNA-binding domain 420 528 IPR036390 -
Adu05g03497 655 Pfam NB-ARC domain 207 430 IPR002182 GO:0043531
Adu05g03497 655 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 622 IPR044974 GO:0006952
Adu05g03497 655 SMART till_3 4 145 IPR000157 GO:0007165
Adu05g03497 655 SUPERFAMILY L domain-like 549 616 - -
Adu05g03497 655 PRINTS Disease resistance protein signature 385 399 - -
Adu05g03497 655 PRINTS Disease resistance protein signature 211 226 - -
Adu05g03497 655 PRINTS Disease resistance protein signature 289 303 - -
Adu05g03497 655 Pfam TIR domain 6 176 IPR000157 GO:0007165
Adu05g03497 655 Gene3D - 350 434 IPR042197 -
Adu05g03497 655 SMART AAA_5 208 351 IPR003593 -
Adu05g03497 655 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 9 622 - -
Adu05g03497 655 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 147 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03497 Adu-Chr5 107560699 107564561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03497 12 615 WRKY Transcription Factor Family AT4G12020 33.712 5.29e-78 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03497 - - ahf:112802989 1174.07