Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03492 ATGCTGGGGGACTCAGCTGTTTTGGGAACAGGAGGAGGCAGCTCTGGAGGAGCAGATGCAGTAGTCGCAACAGCCGCGACTTCTTCTGCCGCGGCTGCTGTAGCTACTGCATCAGCACCACTACCACCACCACAGTCAGTATCAGCAGCACCGCATCATCATCATGACGGTACTGCTGAAATGGTTGGTGGTGGTGGAGGGGGAGGTGGAGGATCAACCTCCGGGGACGACGAGAAAGGAGAGAGGAGCTTCGGCGGGAACAGGTGGCCGAGACAAGAGACTTTGGCTTTGCTCAAAATACGGTCGGATATGGACGTGGCGTTTCGCGATGCCAGTGTTAAGGGTCCTTTGTGGGAAGAGGTTTCAAGGAAGCTAGCAGAGCTTGGATACAAGAGAAACGCGAAGAAATGCAAAGAGAAATTTGAGAATGTGTACAAGTACCACAAGAGAACGAAAGATGGTAGAAGTGGAAAATCTGAAGGAAAAACATATAGGTTCTTTGATCAATTAGAGGCACTTGAAAACAACCCAATTATTCATTCCCCAGCAATACCTCAAAAATCAGCATTGCAAGCAACACCAGTTTCAATGGTAAAAACAACCGCATCATTGCCATCCCCTCCAATAATTACAACAATGCCACAACAACAACAGGTAGTAGTAGCAAGTAGTGGCACCAACACAACATCAGCACCACCTATTAGTATTGCTACTGTTCCATCAATAGCTCCTACTACTATTTCAATGCCTCAAATTCAACCCAATAATAGTAATAATAATAATAATAATAATAATAGTAGTAATAATAATAATCCTGTATATTTTCCTCCACCACCACCACCGCCACCTGCTTCATCTTTTCCGAGTATTCCGGCGGAGCTACTCTCGAATTCGAGTTCTTCTTCGACTTCGTCGGAGGAGACGATCGAAGGAGGGAGTAGGCGGAACAAGAGGAAGAGAAGGTGGAAGGAGTTCTTTGAGAAGCTAATGAAGGAGGTGATAGAGAAGCAGGAGGATCTGCAGAAGAGGTTCCTTGAAGCAATAGAGAAGAGGGAGAAAGAGAGATCCGCTAGAGAAGAAGCATGGAGAGTTCAGGAATTACAAAGAATCAATAAAGAGAGAGAGATTCTCGCTCAAGAGAGGTCCATCGCCGCCGCCAAAGACCAAGCCGTCATGACCTTCTTGCACAAAATTGCCGACCAACAAAACCTTCCTACACCGCCATTCAACAATGTTTCTCAACCATCACCACCTCCACCACCGCCTCCACCACCACCACCGCCACCACAACAAACACAACCTACCCCGCCGGTGGTGGTGCCGCCATTACCCACACCGCCACGGCCGCCACCAAGCATGGAGATGGTGAAAGTTGTTGATAACAACAACAACAACAATGGAGAGAATAACAATAACAACAATAATAATAATTCGTCACCGCTGGCGGCGAGTTCTTCTCGGTGGCCGAAAGCTGAAGTTGAGGCGCTGATAAACCTGAGAACAAGCCTTGATGCGAAGTACCAAGAGAATGGACCAAAAGGACCATTGTGGGAAGAGATTTCAGCGTTGATGAAGAAGCATGGTTATAACAGGAACGCTAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAAGAGAGTAACAAGAAGAGGCCTCAAGATTCAAAGACTTGTCCCTATTTTCACCAGCTTGATGCTCTTTACAGGGAGAGGAATAGCGGCAAGCATGACGCTGCTCCCGCCATTGTCACTACAACGCCGTTAATGGTGAGGCCGGAGCAGCAGTGGCCTCCTCAGACGGACCAGCCCTCCTCGCAGCCGCGGGAAGTAACCATGGAAGACGCTCGGAAGGGAGGCAATGATGAGGACGAGGACGAGGAGAAGGATAATATTGGTGATGAAGATGACGACGAAGACGATGATGACGACGACGAAGGTGGTAGTAACTTTGAGATTGTGGCAAGCAAGCCAGTTTCTGCTGAGTGA 2004 0.481 MLGDSAVLGTGGGSSGGADAVVATAATSSAAAAVATASAPLPPPQSVSAAPHHHHDGTAEMVGGGGGGGGGSTSGDDEKGERSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYKRNAKKCKEKFENVYKYHKRTKDGRSGKSEGKTYRFFDQLEALENNPIIHSPAIPQKSALQATPVSMVKTTASLPSPPIITTMPQQQQVVVASSGTNTTSAPPISIATVPSIAPTTISMPQIQPNNSNNNNNNNNSSNNNNPVYFPPPPPPPPASSFPSIPAELLSNSSSSSTSSEETIEGGSRRNKRKRRWKEFFEKLMKEVIEKQEDLQKRFLEAIEKREKERSAREEAWRVQELQRINKEREILAQERSIAAAKDQAVMTFLHKIADQQNLPTPPFNNVSQPSPPPPPPPPPPPPPQQTQPTPPVVVPPLPTPPRPPPSMEMVKVVDNNNNNNGENNNNNNNNNSSPLAASSSRWPKAEVEALINLRTSLDAKYQENGPKGPLWEEISALMKKHGYNRNAKRCKEKWENINKYFKKVKESNKKRPQDSKTCPYFHQLDALYRERNSGKHDAAPAIVTTTPLMVRPEQQWPPQTDQPSSQPREVTMEDARKGGNDEDEDEEKDNIGDEDDDEDDDDDDEGGSNFEIVASKPVSAE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03492 667 MobiDBLite consensus disorder prediction 290 309 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 402 487 - -
Adu05g03492 667 SUPERFAMILY Formin homology 2 domain (FH2 domain) 419 551 - -
Adu05g03492 667 SMART sant 85 147 IPR001005 -
Adu05g03492 667 SMART sant 484 546 IPR001005 -
Adu05g03492 667 ProSiteProfiles Myb-like domain profile. 486 544 IPR001005 -
Adu05g03492 667 MobiDBLite consensus disorder prediction 410 453 - -
Adu05g03492 667 CDD GT1 486 551 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 247 271 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 247 318 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 457 485 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 592 667 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 29 88 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 630 654 - -
Adu05g03492 667 Pfam Myb/SANT-like DNA-binding domain 87 173 IPR044822 -
Adu05g03492 667 Pfam Myb/SANT-like DNA-binding domain 486 573 IPR044822 -
Adu05g03492 667 MobiDBLite consensus disorder prediction 594 615 - -
Adu05g03492 667 MobiDBLite consensus disorder prediction 272 288 - -
Adu05g03492 667 CDD GT1 87 152 - -
Adu05g03492 667 Coils Coil 323 350 - -
Adu05g03492 667 Gene3D - 89 150 - -
Adu05g03492 667 Gene3D - 488 549 - -
Adu05g03492 667 ProSiteProfiles Myb-like domain profile. 87 145 IPR001005 -
Adu05g03492 667 PANTHER - 36 661 - -
Adu05g03492 667 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 36 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03492 Adu-Chr5 107468721 107471978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03492 77 612 Trihelix Transcription Factor Family AT1G76880 51.134 2.08e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu05g03492 Myb_DNA-bind_4 4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03492 - - gmx:100804788 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03492 05 107468721 107471978 Adu05g03492 05 107468721 107471978 ECH
Adu05g03492 05 107468721 107471978 Adu09g03056 09 118278334 118279653 PCT