Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03488 ATGGACCACAGCGCAGATGCACACCGTACGGACCTGATGACCATAACACGATTCGTGCTCAACGAACAGTCAAAGCACCCTGAATCGCGCGGTGACTTCACCATCTTACTCAGTCACATTGTTCTTGCTTGCAAGTTCGTCTGCTCTTCTGTTAACAAGGCTGGTCTCGCCAAACTCATTGGACTTGCTGGAGAGACTAACGGTGAAGAGCAGAAGAAACTGGATGTGCTTTCCAATGAAGTCTTCATCAAGGCCTTGATTAGCAGTGGCCGAACTAGCATATTGGTTTCGGAAGAAGACGAGGAAGCAACCTTCGTGGAGCCTTCTTTGCGTGGAAAGTACTGCGTCGTTTTTGATCCTTTGGATGGTTCCTCTAACATTGATTGTGGCGTTTCAATTGGCACCATATTTGGGATTTATATGGTGAACGATGTGAATGAACCAACACTAGAAGATGTTTTGCAACCTGGCAAGAACATGTTGGCTGCTGGTTATTGTATGTATGGAAGCTCTTGCACGTTTGTGTTAACCACTGGTAGTGGTGTTAATGGTTTCACGCTTGACCCATCACTTGGTGAGTTCATACTAACTCACCCTGACATCAAGATCCCAAAGAAAGGCAAGATTTATTCAGTGAATGAAGGAAATGCTAAGAACTGGGATGGTCCTACTGCCTTTTATGTGGAGAGATGCAAGTTCCCCAAAGATGGTTCATCACCAAAGTCTCTAAGATATATTGGAAGTATGGTAGCTGATGTTCATCGAACATTGCTATATGGAGGTATCTTTTTGTACCCTGCTGATAAAAAGAGTCCTAATGGAAAACTGCGGGTACTATACGAGGTATTTCCAATGTCATTTTTGATGGAACAAGCAGGGGGACAAGCATTCACTGGCAAACAACGGGCACTTGATTTGATTCCTAAGAAGTTACATGAGAGATCTCCCATATTCCTTGGAAGCTACGATGATGTTGAGGAAATCAAAGCTCTTTATGCTGCTGAGGCCAAGTAG 1014 0.4418 MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLACKFVCSSVNKAGLAKLIGLAGETNGEEQKKLDVLSNEVFIKALISSGRTSILVSEEDEEATFVEPSLRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMVNDVNEPTLEDVLQPGKNMLAAGYCMYGSSCTFVLTTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAFYVERCKFPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALDLIPKKLHERSPIFLGSYDDVEEIKALYAAEAK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03488 337 PRINTS Fructose-1,6-bisphosphatase signature 153 176 IPR028343 GO:0042132
Adu05g03488 337 PRINTS Fructose-1,6-bisphosphatase signature 73 99 IPR028343 GO:0042132
Adu05g03488 337 PRINTS Fructose-1,6-bisphosphatase signature 210 237 IPR028343 GO:0042132
Adu05g03488 337 PRINTS Fructose-1,6-bisphosphatase signature 308 333 IPR028343 GO:0042132
Adu05g03488 337 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Adu05g03488 337 PRINTS Fructose-1,6-bisphosphatase signature 184 207 IPR028343 GO:0042132
Adu05g03488 337 ProSitePatterns Fructose-1-6-bisphosphatase active site. 274 286 IPR020548 GO:0005975|GO:0042578
Adu05g03488 337 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 334 IPR000146 GO:0005975|GO:0016791
Adu05g03488 337 Gene3D - 4 201 - -
Adu05g03488 337 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 203 332 IPR044015 -
Adu05g03488 337 PIRSF FBPtase 9 337 IPR028343 GO:0042132
Adu05g03488 337 Gene3D - 202 337 - -
Adu05g03488 337 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 199 IPR033391 -
Adu05g03488 337 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 337 - -
Adu05g03488 337 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 337 IPR000146 GO:0005975|GO:0016791
Adu05g03488 337 CDD FBPase 20 332 IPR000146 GO:0005975|GO:0016791
Adu05g03488 337 PIRSF FBPtase_SBPase 9 337 IPR000146 GO:0005975|GO:0016791
Adu05g03488 337 SUPERFAMILY Carbohydrate phosphatase 8 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03488 Adu-Chr5 107438955 107441540 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu05g03488 FBPase 2.3e-78 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03488 K03841 - oeu:111382940 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03488 05 107438955 107441540 Adu05g03488 05 107438955 107441540 ECH
Adu05g03488 05 107438955 107441540 Adu09g03053 09 118235976 118238654 PCT