Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03477 ATGGTAAGTGGTGGTGGCCGTATTAGGCCTCAAGAGGATTCACTTAATAACCCCATTGATATGGTAGTTGGTACCCTTGGAAGGATTCTTCAACATATTGAGGAGGGCAACCTGGTGTATGGCGACATCAAATACTTGGTCTTGGATGAGGCAGATACAATGTTTGATCGTGGCTTTGGTCCTGATATACGCAAATTTCTGGCCCCATTGAAACATCGTGCATCAAAGTCTGATGGCCTAGGTTTTCTGATCGTCTTGGTAACCGCAACAATGACAAAGGCTGTGCAAAAGCTAATTGATGAGGAGTTTCAGGGTTCTGAGAACAAGCTGGAAGCATTACTTCAGGTACTTGTGCCAAGCCGAGCAAAAGGCAACAAGGTGATGGTTTTTTTGCAATACTTTGGACTCTAG 411 0.4453 MVSGGGRIRPQEDSLNNPIDMVVGTLGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKHRASKSDGLGFLIVLVTATMTKAVQKLIDEEFQGSENKLEALLQVLVPSRAKGNKVMVFLQYFGL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03477 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 100 IPR027417 -
Adu05g03477 136 Pfam DEAD/DEAH box helicase 3 98 IPR011545 GO:0003676|GO:0005524
Adu05g03477 136 Gene3D - 1 107 IPR027417 -
Adu05g03477 136 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 109 IPR014001 -
Adu05g03477 136 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 1 105 - -
Adu05g03477 136 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 105 131 - -
Adu05g03477 136 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 105 - -
Adu05g03477 136 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 105 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03477 Adu-Chr5 107322981 107324263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03477 4 69 Eukaryotic Initiation Factors Gene Family AT3G13920 39.130 4.22e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03477 - - ahf:112766979 229.565