Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03474 ATGCGCCTCCACCGCAGCGACAAATACTCCTCCCCCGCCGGAACCATGAGGTACCGGGGTGTGAGGCGGAGGCCATGGGGACGTTATGCCGCTGAGATAAGGGACCCTCAATCTAAGGAGCGGCGTTGGCTGGGGACATATGACACGGCGGAGGAAGCCGCCTGCGCCTACGACTCCGCTGCCAGAGTCTTGCGTGGCCCCAAGGCGAGAACTAACTTTTTGTACACTACTTCCCCTCCTCAACCTTCTTCCATCTTCCTCACCAACAAAAACAATCATAAAGACATCCTTAACCGCAGTAGCCACCTCTTCTTCAACAGCCGTAACTGCCACATGGGTGGTTCTTCATTTTCTACCTTCCAGCAGCTTAACTCCACAAACATGCTCATAGCCCCTTCTGCTTCCTTCTACTCTTACACCAACCCCAAGGACAGTTTAGTCAACTCATCACATGCTGGCAATGCTAATAACCCTTCTCTTTCATCTTCCTTATCATACCCCAAGGGCAGTTTAGTCAACTCATCACATGGTGGCAATGCTAACCCTTCTCTTTCATGTTCCATTAGCCACCATTTATCCTACCCCAAGGGCAGTTTAGTCAACTCATCAAATGGTAGCAATGCTCCTAACCACAGCGCAGCCTTTTCTTCCTCTTGCCTGACGAACACAAACAGTGATAATAATTATAAAGCTGATGGCAGTGAATACTCGCAAGACTCAGACTCATCATCGGGGTTGTTGGAAGAGATAGTTAGAGGTTTCTTGAAAACTCCAAAGCCCACTAAAAGTGAGTCTTTGTTGTTATTAGCTGCTCCTACACCTACTTCTCCATCCCAAGTTAAGGCTCACTCATTTCCTCCTCTTTCCGCTCTTTCCACAGGCGACACCATGAAGAAAGACCAGGATACGGCGGCTCCCTCTAGCATGCCTTTTACTCAGGAGAACAACAACAATAATAATCATCATCATCTTGAAGAGTGGCCAACCATGGAAGACATTTTTCATCAGTACCCGGACTTTCTTAATTAG 1029 0.482 MRLHRSDKYSSPAGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTYDTAEEAACAYDSAARVLRGPKARTNFLYTTSPPQPSSIFLTNKNNHKDILNRSSHLFFNSRNCHMGGSSFSTFQQLNSTNMLIAPSASFYSYTNPKDSLVNSSHAGNANNPSLSSSLSYPKGSLVNSSHGGNANPSLSCSISHHLSYPKGSLVNSSNGSNAPNHSAAFSSSCLTNTNSDNNYKADGSEYSQDSDSSSGLLEEIVRGFLKTPKPTKSESLLLLAAPTPTSPSQVKAHSFPPLSALSTGDTMKKDQDTAAPSSMPFTQENNNNNNHHHLEEWPTMEDIFHQYPDFLN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03474 342 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Adu05g03474 342 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 10 341 - -
Adu05g03474 342 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 10 341 - -
Adu05g03474 342 MobiDBLite consensus disorder prediction 274 317 - -
Adu05g03474 342 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Adu05g03474 342 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Adu05g03474 342 CDD AP2 17 73 IPR001471 GO:0003700|GO:0006355
Adu05g03474 342 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Adu05g03474 342 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Adu05g03474 342 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Adu05g03474 342 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03474 Adu-Chr5 107291333 107292361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03474 15 86 AP2-EREBP Transcription Factor Family AT1G12980 77.778 1.75e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu05g03474 AP2 6.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03474 - - aip:107641557 513.842