Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03461 ATGAAAAAAGGTAAAGAGAAAACACTTGAGGATGAGGATATCCCAAAGCTGCACGAGCCGGATCGAGCAGAAAGTTGCTATTCTGTGTTTATAGAACAACTTAACAAACAGAAACAAAAAGAACCAACACTGCAGCCATCAGTATTTTGGACTATAATGTCCTGCCACTGGAGAGAGATTTGGATTTCAGGATTCTTTGCATTTATTAAGGTAGTTACTCTGTCTTGTGGTCCCCTGCTTTTGAATGCATTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATGTGTTGGCCATTTCACTTTTCTTTGCAAAGATCATAGAATCCTTGTCTCAAAGGCAATGGTATTTTCGATGTAGACTCGTTGGTATGAAGGTTAGATCTCTTCTCACTGCAGCCATCTATAAGAAACAATTGAAGCTATCCAATGCTGCCAGATTGGAGCATTCTGGTGGTGAGATAATGAATTATGTGACTGTTGATGCATATAGGATTGGAGAATTTCCATTTTGGTTTCATCAGATGTGGACAACAAGCTTCCAAATATGCATTGCTTTGGTGATTCTTGTCCGAGCCATTGGACTCGCGACAATAGCCTCAATGGTAGTAATAATTCTCACTGTACTTTGCAATGCTCCATTGGCAAAGCTACAGCAGAAGTTTCAAAGCAAGCTCATGGTGGCACAAGATGAGAGATTGAAGGCTAATTCTGAGGCTCTTGTGAATATGAAAGTTCTGAAGCTATATGCATGGGAGAAACATTTTAAGAAGGCTATTGAAGGCTTAAGGAATGTGGAACTTGAAATGTTATCAGCAGTGCAATCAAGAAAGGCCTACAACATCTTTCTCTTCTGGTCTTCGCCTATTCTGGTGTCCGCGGCTTCCTTTGCTGCATGCTACTTCTTGGAGATTCCTTTGCATGCAAACAATGTTTTCACTTTTGTGGCAACACTGCGCCTTGTGCAAGAGCCAATCACAACCATCCCAGATGTTATTGGAGTGGTTATTCAATCGAAAGTTGCATTCGCTCGAATTGGGAAGTTTCTTGAGGCATCTGAATTGCAGAATGCAAATTGCAGGAAGAGTTGTGTTGATGATAACCTCAGAGGCTCAATTTCAATCAAGTCTGCTGATTTTTCATGGGAAGATAATGTGTCAAAACCAACACTTAGAAACATAAATTTGGAGGTTAGACATGGACAAAAGGTAGCAATTTGTGGAGAAGTTGGATCAGGAAAATCAACTCTCTTAGCAACAATTCTTGGAGAAGTTCCAAATACAAAGGGAACTATTGAAGTTTATGGCAGTTTTGCATATGTTTCTCAAACAGCATGGATACAGTCAGGTACAATAAGGGAAAATATTTTGTTTGGAGCAGATTTGGATCCACAAAGATATGAAGAGACACTTTATAGATCTTCACTGATAAAGGATCTTGAGTTGTTTCCCTATGGAGATCTTACCGAAATAGGCGAGAGGGGAGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAGCTCGCTCGTGCGCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCTCACACAGCCACAAATTTGTTTAAGGAATATATCATGGAAGGACTTGCAGGGAAGACTGTGTTACTTGTGACTCATCAAGTTGACTTCCTACCAGCTTTTGATTCTGTTATGTTGATGTTAGATGGGGAAATTCTACAAGCTGCTCCTTATCATCATCTATTGGAATCAAGCCGAGAATTCCAAGAACTCGTCGAGGCTCACAAGAAGACTGCTGGTGCTGACCATCAAGTTGACACTCCTTCTTCCAAGAGAGATTCAACTTCTGGCAGAGAGATTAAGCAAGATTTCTTGGAGAAGAAGTTAGAAGCTTCAAACGAAAATAAGTTGATTAAGCAAGAAGAAAGAGAGATAGGAGACACAGGCTTGAAGCCTTACATTCAGTATCTGAATCAGATGAAGGGATACATATACTTTGCTGCCGCTACTCTTTGTCACATTTTATTTGTAACTGGCCAAATAATTCAAAACTCATGGATGGCTGCTAATGTTGACAACCCTCATATCAAAACTCTGAAATTGATCTTAGTCTACTTGTTGATAGGAGTTGTTTCAATTGTTTTTATGTTAATCAGAACTTTTCTTATAGTTGCTTTAGGTCTTCTATCATCAAAACATCTATTTTCACAGTTGATGAACTCCCTTTTCCGCGCACCGATGTCTTTTTATGACTCCACACCTTTGGGAAGGATACTTAGCAGGGTATCTGCAGATATGAGCATTGTGGATCTTGATGTACCATTTTTCCTTGCATATACTGTGGGGGGTACTACAAATTTTTATTCTAATCTTGCAGTTTTATCATTTGTGAGTTGGCAAGTCTTGTTTGTTGCCATACCACTGGTTTTTGCTGCGATTCAATTGCAGAAATACTACTTTGCTACTGCAAAAGCATTGATGAGGTTAAATGGCACAACAAAATCATTTGTAGCTAATCATGTAGCAGAAACTAATGCTGGAGCTGTGACAATAAGGGCCTTTAAGGAGGAAGATCGCTTTTTCAAGAAGAATCTTGATCTGATTGATGTCAATGCTAGTCCATTCTTCCATAGTTTCACTTCAAATGAATGGTTGATCCAACGGTTAGAAACAATCAGTGCTGTTGTTCTATCTGCTGCAGCACTTTGCATGGTTGTGCTTCCACCTGAGACTTTCCCCGCCGGATTTATTGGCATGGCACTCTCTTATGGCCTTTCACTGAACAATTCCCTTGTATTTTCAATTCAATTTCAATGCACTCTAGCAAATTATATAGTATCTGTAGAGAGGATAAATCAATATATGTATATACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAATCGCCCTCCGGTTAATTGGCCAGTTGCAGGCAAAGTAGAAATTAGTAACTTGCAGATAAGATACAGGGCTAATGGACCACTTGTACTCCATGGAATTACATGCACATTTGAAGGAGGACACAAGATTGGTATTGTTGGCAGGACAGGAAGTGGGAAGTCCACTCTTATTAGTGCTTTGTTTCGCCTTGTCGAGCCGGCCGGTGGAAGAATTGTAATGGATGGTGTAGACATATCCTCGATCGGCCTTCATGATTTGAGGTCACATTTAGGTGTTATACCTCAGGATCCTACTCTTTTTAATGGAACAGTTAGATATAATTTGGACCCTTTGTCTCAACATTCTGATGAAGAGATATGGGAGGTTCTTGGAAAGTGTCAGTTGCGAGAAGCCGTGCAAGAAAAAGAAAAGGGCTTAGACTCCTCAGTTGTTGAAGATGGATCGAATTGGAGTATGGGACAAAGGCAGTTATTCTGTCTAGGCCGCGCCCTTTTGAGGCGAAGTAGGATATTGGTGCTAGATGAAGCAACGGCATCAATTGATAATGCAACAGATCTTATTTTGCAGAAAACAATTAGAACAGAATTTGCAGATTGTACAGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTCTCCATAAGTGATGGAAAATTGATAGAGTATGATGAGCCAAAGAAGTTAATGAAGAGAGAAGGGTCATTGTTTGGGAAGCTTGTGAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 3696 0.4007 MKKGKEKTLEDEDIPKLHEPDRAESCYSVFIEQLNKQKQKEPTLQPSVFWTIMSCHWREIWISGFFAFIKVVTLSCGPLLLNAFILVAEGNESFKYEGYVLAISLFFAKIIESLSQRQWYFRCRLVGMKVRSLLTAAIYKKQLKLSNAARLEHSGGEIMNYVTVDAYRIGEFPFWFHQMWTTSFQICIALVILVRAIGLATIASMVVIILTVLCNAPLAKLQQKFQSKLMVAQDERLKANSEALVNMKVLKLYAWEKHFKKAIEGLRNVELEMLSAVQSRKAYNIFLFWSSPILVSAASFAACYFLEIPLHANNVFTFVATLRLVQEPITTIPDVIGVVIQSKVAFARIGKFLEASELQNANCRKSCVDDNLRGSISIKSADFSWEDNVSKPTLRNINLEVRHGQKVAICGEVGSGKSTLLATILGEVPNTKGTIEVYGSFAYVSQTAWIQSGTIRENILFGADLDPQRYEETLYRSSLIKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFKEYIMEGLAGKTVLLVTHQVDFLPAFDSVMLMLDGEILQAAPYHHLLESSREFQELVEAHKKTAGADHQVDTPSSKRDSTSGREIKQDFLEKKLEASNENKLIKQEEREIGDTGLKPYIQYLNQMKGYIYFAAATLCHILFVTGQIIQNSWMAANVDNPHIKTLKLILVYLLIGVVSIVFMLIRTFLIVALGLLSSKHLFSQLMNSLFRAPMSFYDSTPLGRILSRVSADMSIVDLDVPFFLAYTVGGTTNFYSNLAVLSFVSWQVLFVAIPLVFAAIQLQKYYFATAKALMRLNGTTKSFVANHVAETNAGAVTIRAFKEEDRFFKKNLDLIDVNASPFFHSFTSNEWLIQRLETISAVVLSAAALCMVVLPPETFPAGFIGMALSYGLSLNNSLVFSIQFQCTLANYIVSVERINQYMYIPSEAPEVIEGNRPPVNWPVAGKVEISNLQIRYRANGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLISALFRLVEPAGGRIVMDGVDISSIGLHDLRSHLGVIPQDPTLFNGTVRYNLDPLSQHSDEEIWEVLGKCQLREAVQEKEKGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLSISDGKLIEYDEPKKLMKREGSLFGKLVKEYWSHFQSAESH 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03461 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 985 1219 IPR003439 GO:0005524
Adu05g03461 1231 CDD ABC_6TM_ABCC_D2 671 960 IPR044726 GO:0140359
Adu05g03461 1231 SUPERFAMILY ABC transporter transmembrane region 49 349 IPR036640 GO:0005524|GO:0016021
Adu05g03461 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 681 948 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g03461 1231 CDD ABCC_MRP_domain2 983 1203 - -
Adu05g03461 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1212 IPR027417 -
Adu05g03461 1231 SUPERFAMILY ABC transporter transmembrane region 656 965 IPR036640 GO:0005524|GO:0016021
Adu05g03461 1231 CDD ABCC_MRP_domain1 376 576 - -
Adu05g03461 1231 MobiDBLite consensus disorder prediction 603 623 - -
Adu05g03461 1231 Pfam ABC transporter 1002 1150 IPR003439 GO:0005524
Adu05g03461 1231 Pfam ABC transporter 394 528 IPR003439 GO:0005524
Adu05g03461 1231 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1 1231 - -
Adu05g03461 1231 SMART AAA_5 403 576 IPR003593 -
Adu05g03461 1231 SMART AAA_5 1011 1203 IPR003593 -
Adu05g03461 1231 CDD ABC_6TM_ABCC_D1 62 349 IPR044746 GO:0140359
Adu05g03461 1231 Pfam ABC transporter transmembrane region 61 322 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g03461 1231 Pfam ABC transporter transmembrane region 670 908 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g03461 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 378 599 IPR003439 GO:0005524
Adu05g03461 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 599 IPR027417 -
Adu05g03461 1231 ProSitePatterns ABC transporters family signature. 501 515 IPR017871 GO:0005524
Adu05g03461 1231 Gene3D - 371 605 IPR027417 -
Adu05g03461 1231 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 1231 - -
Adu05g03461 1231 Gene3D - 969 1220 IPR027417 -
Adu05g03461 1231 Gene3D ABC transporter type 1, transmembrane domain 632 966 IPR036640 GO:0005524|GO:0016021
Adu05g03461 1231 Gene3D ABC transporter type 1, transmembrane domain 31 357 IPR036640 GO:0005524|GO:0016021
Adu05g03461 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 341 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03461 Adu-Chr5 107070107 107076719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03461 370 621 Calmodulin-binding Proteins AT2G36910 30.403 7.41e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03461 K05666 - gmx:100787314 1999.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03461 05 107070107 107076719 Adu09g03041 09 118003473 118046012 PCT