Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03442 ATGAGTAATGAGGAGGATTGGGATCTCTTTGCCATAGTTAGAAGCTGCAAAGCTGCAAACAACACTGCACAAACTCCACAAGACACAACAAAAACTAGTAGTAATAGCATCATGTCTACTTCTTCTACAACTTGCTTGGCCACTACTACTATCACTGCAGAACAAAATGATGGTCCATTTTCTTCTAACAATTTTGTGCAGCCCAGGACCAATGGTTTCCAAGAGTTAGAACAATTGCTCAATACCTTTAACCCCACCATCACCACCACCACCACTACCACTAGTGCCCATGGCATCAATTCTAATAATCCTCCCACTTTTCCTGATTTCACAGCACCGCCATCCACCCTTGGAGCCTCCACTTCTGGTTTTGATGATAGATTCCACCACCACCAACAACATCAACAAAAGCAGCATAATCTACTACAGGTTCAAGTTCCCCAAACTAGTACAACTACTTCTCTGACTTTATTACCAAGCTCAGAATCACAATCACAATCACAAACGCAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAAAAAATGGTATGCCATGTAACCGCAGATAACCTCTCATCAGATTTGTGGGCATGGCGTAAATATGGCCAAAAACCCATCAAGGGTTCCCCATATCCAAGAAACTATTACAGATGCAGCAGCTGCAAAGGTTGTGTAGCAAGAAAGCAAGTAGAGCGAAGCTTATCAGACCCCACCATGTTTGTTGTAACTTACACCGGAGAACACAAGCACGCTAAACCGGCTCACCGGAACTCACTCGCCGGAAGCACCCGGAAACCATCCACGCCTCTTAAGTATTTGATTGGGGGTGTGTGA 840 0.4405 MSNEEDWDLFAIVRSCKAANNTAQTPQDTTKTSSNSIMSTSSTTCLATTTITAEQNDGPFSSNNFVQPRTNGFQELEQLLNTFNPTITTTTTTTSAHGINSNNPPTFPDFTAPPSTLGASTSGFDDRFHHHQQHQQKQHNLLQVQVPQTSTTTSLTLLPSSESQSQSQTQTPRSRKRKSQQKKMVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCVARKQVERSLSDPTMFVVTYTGEHKHAKPAHRNSLAGSTRKPSTPLKYLIGGV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03442 279 Pfam WRKY DNA -binding domain 196 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03442 279 ProSiteProfiles WRKY domain profile. 189 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03442 279 Gene3D WRKY domain 177 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu05g03442 279 SMART WRKY_cls 194 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu05g03442 279 MobiDBLite consensus disorder prediction 110 184 - -
Adu05g03442 279 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 5 268 - -
Adu05g03442 279 SUPERFAMILY WRKY DNA-binding domain 189 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu05g03442 279 MobiDBLite consensus disorder prediction 137 174 - -
Adu05g03442 279 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 268 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03442 Adu-Chr5 106848085 106851214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03442 173 272 WRKY Transcription Factor Family AT5G52830 79.000 1.78e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu05g03442 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03442 K13425 - aprc:113866622 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00245 02 2757934 2759567 Adu05g03442 05 106848085 106851214 ECH
Adu04g02505 04 111275460 111277935 Adu05g03442 05 106848085 106851214 ECH
Adu09g00311 09 3291242 3298122 Adu05g03442 05 106848085 106851214 ECH
Adu05g03442 05 106848085 106851214 Adu05g03442 05 106848085 106851214 ECH