Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03432 ATGGTATCCAAAAACCCGAACCCGCCGGAGGGCNNNNNNNNNNNNNNNNNNNNNNNNNCTGTATCCGCCCCTAACTCCGCGGAGGACGCCGCAAAGAAAATCCGAAAGCCATACACTATCACTAAGTCCAGGGAGAATTGGACTGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGGAGCATTTGTTGGATCAAAGACAGTTATACAGATTCGTAGTCATGCACAGAAATACTTCATAAAAGTTCAGAAGAGTGGGACAAGTGAGCATCTTCCTCCACCCAGGCCGAAAAGAAAAGCTGCCCATCCTTATCCTCAAAAGGCTTCCAAAAATGCTCCTTTACTCTCACAGCTATCAGAATCTTTTCAATCTTCATCTGCTTTACTTGAGTCCGGATATGTCCTGAAACATGACCCCTCCACAATGCTTAAAACTCCTATTATGAACACTGTGGTGCCTTCATGGTCAAACTCCACCTTGCAAACCACTAATTTACTGCATGTACCAAAAGTGAACGACCCTTCCGGTAGCAGTGAGAGTACCCCCAGAGTGCAGCCAGGTGATGAATCCAATGGACAGGGGAATAGTAGCTTTCCACTAAGAGTGCTTCCCGATTTCACTCAAGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATACAACTGATCATTTGCACAAACTGAAAAACATGGACCGTATAGATGTTGAGACGGTCCTGTTGTTGATGAGAAATCTCTCTGTCAATTTAACTAGCCCAGATTTTGAGGACCATAGGAAGGTTCTTTCAACATACGAGGTTGAACTTGATACAGATGACTACATCAATGCAGATATACTTCAGGATGATCAGTTGAAGAGTGCTGCTACCTAG 903 0.4308 MVSKNPNPPEGXXXXXXXXXVSAPNSAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIGAFVGSKTVIQIRSHAQKYFIKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPLLSQLSESFQSSSALLESGYVLKHDPSTMLKTPIMNTVVPSWSNSTLQTTNLLHVPKVNDPSGSSESTPRVQPGDESNGQGNSSFPLRVLPDFTQVYSFIGSVFDPNTTDHLHKLKNMDRIDVETVLLLMRNLSVNLTSPDFEDHRKVLSTYEVELDTDDYINADILQDDQLKSAAT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03432 300 PANTHER PROTEIN REVEILLE 6 22 288 - -
Adu05g03432 300 SMART sant 43 91 IPR001005 -
Adu05g03432 300 ProSiteProfiles SANT domain profile. 42 93 IPR017884 -
Adu05g03432 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Adu05g03432 300 Pfam Myb-like DNA-binding domain 44 89 IPR001005 -
Adu05g03432 300 Gene3D - 46 94 - -
Adu05g03432 300 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Adu05g03432 300 MobiDBLite consensus disorder prediction 173 210 - -
Adu05g03432 300 ProSiteProfiles Myb-like domain profile. 39 89 IPR001005 -
Adu05g03432 300 PANTHER SWI/SNF COMPLEX-RELATED 22 288 - -
Adu05g03432 300 MobiDBLite consensus disorder prediction 1 31 - -
Adu05g03432 300 MobiDBLite consensus disorder prediction 94 120 - -
Adu05g03432 300 CDD SANT 46 89 IPR001005 -
Adu05g03432 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 91 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03432 Adu-Chr5 106757042 106760678 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu05g03432 Myb_DNA-binding 1.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03432 - - gmx:100783949 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03432 05 106757042 106760678 Adu09g02333 09 110386233 110390321 ECH
Adu05g03432 05 106757042 106760678 Adu05g03432 05 106757042 106760678 ECH
Adu05g03432 05 106757042 106760678 Adu09g02333 09 110386233 110390321 PCT