Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03422 ATGGCTGCTTCTTCTTCCATGATTTTCATTGGTGATGATGGTACCAACCAAGGCTCAAACTTTCTCTCTTCTGGCAAATCCTTTTCTCTCAGAAACCAAAACCCAAATCCAAAGTTGCCATCTTTGTATCACACTGCAAGAGTTTTCACCAACAATGGTGGCTACAGGTTCAGCATGAGGAAAAACGGCACTCACTTGGTTCGTTTTCATTTCTCACCTTTTAAGGCACAAGGTCATGATCTTAAATCTGCAAACTTTAGTGTCTTGGTTGATGGGAATTTGGTTCTCAGTAGGTTCAATTTCAAGCCAAATAATGATGATGCAATGATTAAAGAGTTCATTTTGAAATCAGAGTCTGATTTTCTTGAAATTATGTTTAGGCCTTTGAGGAATTCTGGTTTTGGATTTGTCAATGCTGTGGAAGTTTTTTCTGCCCCTGATGATTTTCTTTTAGATTTTGGAGCTAGGTTTGTTAGTGCCTCTGGTGTTGAGGAGTACAAGAACTTCTCAAATCAGGTTTTTGAAACTGTTCATAGGATCAATGTTGGGGGTTCGAAATTAACCCCTTTTAATGATACCCTTTGGAGGACTTGGATCCCTGATGAGGATTTTCTTGTCTTAAAGGAAGCAGCTAAGGCTGCAGTTACCACTCACACCCCCAATTATCAGAAGGGAGGTGCAACCCGAGAGATTGCACCGGATAATGTTTATATGACTGCTCAGGAGATGAATATGAATCAGTCCACCTTAGCTTCACAGTTCAACATAACATGGAATTTTCCGGTGGCTTCCGGTGGCGTTCGACACTTGATTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTGCTTTACTTTGATGTGTATATAAACAACTACTCTGCATATAAGGATGTTGATCTGTCATCCCTTACATTCCACGCACTTGCATCTCCAGTCTATGTGGATTTCATTGCAGATTCTGATGATTCGGGTGTTATTCAGATAAGTGTTGGTCCTTCTGATCTTAGCAGTTCAATGAGGAAGAATGCCATACTGAATGGAGCAGAGATATTGAAGATGGTTAATGTCATGGATTCGCATGTTTCGCCGAGGAAGAAGAGGATTTGGGTTTTGGTAGGCTCAATTGTTGGAGGGACTATTGTTTTGGTTCTAGTTGTAGCTGCTATTTTGCTTATTGTCAAATGCAAGAGGAAGAAACCAAGAGAAAGATCAGTAGAAAGTGTAGTGTGGACTCCGTTGCGCATGTTTGGAGGGAGTTCACAAAGTAGAATGTCTGAAGCTGTAGCTTTTCCATCTCCTGGTTCTTATGGATATCTTGGTTTGAAGATCCCTTTTGCTGAGATTCAATTAGCAACAAACAATTTCGATAGAACTTTGATTATAGGGTCTGGAGGTTTTGGCATGGTTTATAAAGGAGTTCTCAGGGACAATTTAAAGGTTGCTGTCAAGAGAGGAATGCCAGGATCAAGGCAGGGCCTTCCGGAATTCCAGACTGAAATCACTATTTTGTCCAAGATTCGCCATCGCCATCTTGTTTCGCTGGTTGGATACTGTGAAGAACATTCAGAAATGATTCTTGTTTATGAGTATGTGGAGAAAGGACCACTTAAGAAGCATCTGTATGGCTCTTCAGCACATCCACCTTTGTCCTGGAAGCAGCGACTCGAgatatgcattggcgcggctagagagtatttccggaggcagcaactcacggataagtcagatgtgtactcattcggcgttgtgcttttcgaggtgCTGTGTGCTAGACCTGCTGTTGATCCACAACTTGATAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGTCAGAAGAAGGGAATGCTTGAACAAATCATTGATCCATGTCTTGTTGGACAAATCAAGGAGAGTTCATTGAAGAAATTCGGGGAAACAGCAGAGAAATGTTTGGCTGAGTATGGTGTTGATAGGCCAAGCATGGGTGATGTGTTGTGGAATTTGGAGTACTTGCTTCAGCTCCAAGAAAATGGACAACAAGGTGAACCGGATAAGGCGACTGCGACGATTGTTCCCGGGAATGCTTCTAGCAGCACAAGAACTGAAGATGATTCTGATAAAGGCTATTCTGACATAAGTTCTAGCCAGGTTTTTTCTCAACTAATGACCAATGAAGGCAGATAG 2178 0.3972 MAASSSMIFIGDDGTNQGSNFLSSGKSFSLRNQNPNPKLPSLYHTARVFTNNGGYRFSMRKNGTHLVRFHFSPFKAQGHDLKSANFSVLVDGNLVLSRFNFKPNNDDAMIKEFILKSESDFLEIMFRPLRNSGFGFVNAVEVFSAPDDFLLDFGARFVSASGVEEYKNFSNQVFETVHRINVGGSKLTPFNDTLWRTWIPDEDFLVLKEAAKAAVTTHTPNYQKGGATREIAPDNVYMTAQEMNMNQSTLASQFNITWNFPVASGGVRHLIRLHFCDIVSPALNLLYFDVYINNYSAYKDVDLSSLTFHALASPVYVDFIADSDDSGVIQISVGPSDLSSSMRKNAILNGAEILKMVNVMDSHVSPRKKRIWVLVGSIVGGTIVLVLVVAAILLIVKCKRKKPRERSVESVVWTPLRMFGGSSQSRMSEAVAFPSPGSYGYLGLKIPFAEIQLATNNFDRTLIIGSGGFGMVYKGVLRDNLKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGYCEEHSEMILVYEYVEKGPLKKHLYGSSAHPPLSWKQRLEICIGAAREYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWALECQKKGMLEQIIDPCLVGQIKESSLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYLLQLQENGQQGEPDKATATIVPGNASSSTRTEDDSDKGYSDISSSQVFSQLMTNEGR 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03422 725 SMART serkin_6 458 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03422 725 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 566 - -
Adu05g03422 725 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 567 690 - -
Adu05g03422 725 MobiDBLite consensus disorder prediction 675 725 - -
Adu05g03422 725 Pfam Protein tyrosine and serine/threonine kinase 463 565 IPR001245 GO:0004672|GO:0006468
Adu05g03422 725 Gene3D - 173 357 - -
Adu05g03422 725 Gene3D - 1 146 - -
Adu05g03422 725 MobiDBLite consensus disorder prediction 708 725 - -
Adu05g03422 725 ProSiteProfiles Protein kinase domain profile. 458 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g03422 725 Pfam Malectin-like domain 19 355 IPR024788 -
Adu05g03422 725 ProSitePatterns Protein kinases ATP-binding region signature. 464 486 IPR017441 GO:0005524
Adu05g03422 725 Gene3D Transferase(Phosphotransferase) domain 1 567 673 - -
Adu05g03422 725 PANTHER OS07G0166700 PROTEIN 567 690 IPR045272 GO:0004714|GO:0006468
Adu05g03422 725 MobiDBLite consensus disorder prediction 675 697 - -
Adu05g03422 725 PANTHER OS07G0166700 PROTEIN 8 566 IPR045272 GO:0004714|GO:0006468
Adu05g03422 725 Gene3D Transferase(Phosphotransferase) domain 1 445 566 - -
Adu05g03422 725 SUPERFAMILY Protein kinase-like (PK-like) 443 664 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03422 Adu-Chr5 106655680 106658236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03422 42 725 Receptor kinase-like Gene Family AT3G46290 41.108 6.89e-169 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu05g03422 Malectin_like 3.6e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03422 - - gmx:100814974 984.941