Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03399 ATGGCAGTTTCTGCAAAAGAAAAAGCAAAAGCAAAAGCGAAGGGCTATGATGGGAGTATGGAAGTGGTGAAAACGGAAGATAGAATAGATACAATAATCAGACAAGCGATTGGCAGGGAACCTTTTTTCACTTTTCCAAGGGCCACTGACACCCCTGTTCAGTGGATTCAGTTACTTCATGCCTTGGATCAGCAGGGTGTTAGCAATTCTTTTCCAGAACTTCCAGGGTGGCCATTGCTCTATCCTGTAAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCGAGAGTTTTGCTCCACCATTAATTATAGAAGACATATACGTGCACACCATCGATTGAAAAAGCTTGATAAGGATTCTACAAAAAATAGGGACCTTTTAGGAGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGTTGTATCGTTTGAGAATGTGATGCTGGAGGAAGTTCCAGCATCTTCAATTTTAGAAGCTCTGACAACCCTTCTACAAAAGCCAGGATTTTCTTCATTACCACAGTATTATCTGAGGGCTGGTGCTGCCCTTTTGGATATTGTTCACTCTCAGTCTTCCTGCTTTCCCTTATCTTCCCAGGAGTTGTTCACTATCCTTGATGATGCTAGTGAAAAAACATGTTTATGTGGGACTGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAGAAATTTAGTTGCTTGCACATGTTTCTTGCTAGAACAGAAGTTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCCTTGAGGTGCCACAGGCAGCTGGTGGAGGAGGAAGAAGCTGCTCAAAAAAGACAAGCTGAGATATTGGAGAGGAGACGCCAGAAGAAGCTTAGACAAAAAGACCAGAAGGCAAGGGAACAAAGGCATGAGGCAGAAATTGAAGAGCACATTGGGAGCGCAGAAGATGATTTATCAGCAGCAGAAGCATCTTTGGCTACTATTGATTCTGAAGCACATAATCTGGAAACATTCATAGATAGCGCTCCTTCATATGATCCTTTTCAATGCTCTGACACAAATGTAGGACTAGATGGCGTTCAATCGAGTTACAATCTTGGCAGTGATCAGTATATTGAGAGACGGTCGGCACGTCGACCCAATCGTAGGCTCACAGCAGTTTCCAGACAGAAGGGTCTGCAAAAATCACAATGGGCTGTAGCGAATGATTCTCATACAAGCCAGAACTCAACACTTTCAAAGATTGAAGTCATTCAAAAATATGGAACCCATCGTGATCATAGGGTAGCTAATGGTAGTAGAGTTTGGAGTCCAAAGTCAAAACCAGGAATTGATAGGATGGTTCCAGAAGCTAGAGTAGAGAAAGAACCAGACCTAGATAAGGATCATGAAGTTTTGATAGGATCTATATCAATTACTCTAGGGAATTGCAGCCAATCAGAGCGTAATGCAGTGGCATCTCGAGCAGACTGCAATGTTGACAATCTGGCCAACCAGAATAGTTCTCAGAATAAGCCATTGAATCCTGATTTTGTCCAGAATGGCAACAATATGGCCACTAAGCTTTGGAGACCAGTTAGCTGGCACGAAACTAAAAATCCACTTCCAGTTCAAAGTGGTGAGACAGAAGTGAATACAATTCATGAAAATGGAGATTGTCAGAACCAGTCAGATCCAAGTTGTTTAAGGTCGTGCAGTACAGATGGTAGTGATGTCGGTTTCGAGATTAATGTTTCCAATACAGAGGGGATAATGGATCCAGGAAGCTTACAGTTATTATCCAGCCATGCCGCAAAAATTTTTCTCGAACAAAGATGGAAAGAAGCTATGTCATCAAATCATCTGCTTTTGATTGTTTCCGACTATGAACCTCCTGGATGCCAGGAAATACAGGATTCTAGAATGGCAGTATGTCAATCTTCTGAGGTTACAGTGAAGCGGTTAGCTGCAGCCCCGAAGGTTGCTAAATCCAATCACAGAATGAAGCCTGAAAAGGGAACCAAGATAAAATATATTCCCAAACAAAAGACAGCTGCCTAA 2055 0.4229 MAVSAKEKAKAKAKGYDGSMEVVKTEDRIDTIIRQAIGREPFFTFPRATDTPVQWIQLLHALDQQGVSNSFPELPGWPLLYPVKVQLQKCDKCSREFCSTINYRRHIRAHHRLKKLDKDSTKNRDLLGAYWDKLSIEEAKEVVSFENVMLEEVPASSILEALTTLLQKPGFSSLPQYYLRAGAALLDIVHSQSSCFPLSSQELFTILDDASEKTCLCGTAVSMQRYIFDGEAGKIGLEPRNLVACTCFLLEQKLVKAWLADKDAEALRCHRQLVEEEEAAQKRQAEILERRRQKKLRQKDQKAREQRHEAEIEEHIGSAEDDLSAAEASLATIDSEAHNLETFIDSAPSYDPFQCSDTNVGLDGVQSSYNLGSDQYIERRSARRPNRRLTAVSRQKGLQKSQWAVANDSHTSQNSTLSKIEVIQKYGTHRDHRVANGSRVWSPKSKPGIDRMVPEARVEKEPDLDKDHEVLIGSISITLGNCSQSERNAVASRADCNVDNLANQNSSQNKPLNPDFVQNGNNMATKLWRPVSWHETKNPLPVQSGETEVNTIHENGDCQNQSDPSCLRSCSTDGSDVGFEINVSNTEGIMDPGSLQLLSSHAAKIFLEQRWKEAMSSNHLLLIVSDYEPPGCQEIQDSRMAVCQSSEVTVKRLAAAPKVAKSNHRMKPEKGTKIKYIPKQKTAA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03399 684 MobiDBLite consensus disorder prediction 662 676 - -
Adu05g03399 684 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Adu05g03399 684 Coils Coil 271 313 - -
Adu05g03399 684 MobiDBLite consensus disorder prediction 291 310 - -
Adu05g03399 684 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 12 683 - -
Adu05g03399 684 MobiDBLite consensus disorder prediction 656 684 - -
Adu05g03399 684 ProSitePatterns Zinc finger C2H2 type domain signature. 90 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03399 Adu-Chr5 106387030 106392318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03399 20 681 C2H2 Transcription Factor Family AT4G25610 40.648 2.99e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu05g03399 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03399 - - gmx:100809067 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03399 05 106387030 106392318 Adu05g03399 05 106387030 106392318 ECH
Adu05g03399 05 106387030 106392318 Adu09g02352 09 110736556 110741847 PCT